Jatropha curcas (Barbados nut): 105649316
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Entry
105649316 CDS
T03922
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105649316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105649316
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105649316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RPN13_C
Motif
Other DBs
NCBI-GeneID:
105649316
NCBI-ProteinID:
XP_012091323
UniProt:
A0A067JML4
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MADTVQYRLERMVDELDDLERRGLFTHYEIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY
ETQLDSLRRLRKKSVARDMKNKGNKKMKMSVSDFAGVSRIVDIYRLAVLRYKGDIELWFR
YLEFCRERRNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQSGLRVCP
ASEDLWVEYLRMELTYLNKLKARKVALGEDKGTLVRDHRVAEEQQWRDENNGAFMLLDEE
MRNVEGSKVNNGESEKKMDLFREQGLNILKTIYSGAIEALPSSLGLRKRLFEILEATELA
HSEEIRKEILSDMKRDFSKDPEYWDWLARLEMTYSRTTKDTSEGIMSPQLQKAVQVYEQA
LQFVPSPILFNLYAKFFMDAVAPKREENQLSKLSNHAEDIISYLLTIYEKAETFGCITED
LACEYVSFFIQLGRLDEAGKLADKFCNGNFSDSVKLWILRASLEIRCFTNNIPGPSKVDL
RSIFGLFRSVLTKVSISEAEDLWMMALKFFATEKYYLDKLVEMSFVSVAKNGGSDNGFSL
PCAIVNSVLQKDGIQEARETYKRFLALPRPGLALYKICIELEENLASSGDKGCLGNARKI
YESALATHKQNVRLWQDYHAMEVKWGTSETAKRCVYWRARKTSEKLCLHLLLYSDSL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgataccgtgcaataccggctcgagcgcatggtcgacgagctcgacgaccttgag
aggcgagggttattcacgcattatgagatagctgagatcgtgaagcagaggcgaaagttt
gagtatagactgaagcgaccgagtccattgaaacaggattacttggcctacattgagtac
gagacacagcttgactcgcttcgccgcctccgcaagaaatcagtggctcgtgatatgaaa
aacaagggaaacaagaaaatgaagatgtctgtttctgattttgctggggtctcgagaatt
gtggatatttatcggcttgccgtattgagatataagggtgatattgagctatggtttcgg
tatttggagttttgtagagagcgaaggaatggcaggatgaagaaggtcttggctcagcta
attaggtttcatccaaaggtaccaggagtttggatttatgctgcagcttgggaatttgac
cataacttaaatgttgcagcagctcgtgctctaatgcagagtggtttgagagtttgccct
gcatcggaagacctttgggtagagtatctccggatggaacttacttaccttaacaaattg
aaggccaggaaggttgcccttggagaggacaagggcactctggttcgtgatcatagagtt
gctgaggagcaacagtggagagatgaaaacaatggtgcgtttatgttacttgatgaagaa
atgagaaacgttgaaggatcaaaagttaataatggggagtcagaaaagaaaatggattta
tttagagaacaaggtttgaatatacttaagactatctatagtggagcaattgaagctctt
ccttctagcttaggactaagaaaacgtttatttgagatattggaggcaacagagttggca
cattcggaagaaattcgaaaggagatcctaagtgatatgaaaagagacttttctaaagat
cccgaatactgggactggcttgctagacttgaaatgacttattctagaactacaaaggat
acaagtgaaggtatcatgtcaccacagctacaaaaagcagttcaggtttatgagcaggct
ttgcagtttgtgccttctcccattctgtttaatctatatgctaagttctttatggatgct
gttgctcctaaaagagaagaaaaccaactttctaaattatccaatcatgctgaagatatt
atttcttatctattgacgatttatgagaaagctgagacatttggatgcattactgaggat
ttggcttgtgaatatgtttcatttttcatccagctagggaggttagacgaggccgggaaa
ctagcggacaaattttgcaatggcaacttttcagattcagttaaattgtggattttaagg
gcctctttagaaattagatgttttactaataatatccctggaccaagtaaagttgatcta
cgatccatatttggactctttagaagcgtgttgacaaaagtgtcaatatcagaagctgag
gacttgtggatgatggccctcaagttttttgcaacagaaaaatattatctggacaagttg
gttgagatgtcattcgtttcagtagcaaaaaatggtggcagtgataatggattctcccta
ccttgtgcgattgtaaatagtgttcttcagaaggatggaattcaggaagcaagagagaca
tataagcgttttcttgccttgccccgaccaggtcttgctttatacaaaatttgcatcgag
ttggaagagaaccttgcatctagtggtgataaaggttgtcttggaaatgcccgaaaaata
tatgaatctgcacttgcaacgcataagcagaatgtgagattgtggcaagattaccatgcc
atggaggttaagtggggaacatcagaaacagcaaaacgctgcgtatactggcgtgcacga
aagacatctgaaaaactctgcttgcatttgttgctctattcagattcgttgtaa
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