KEGG   Jatropha curcas (Barbados nut): 105649388
Entry
105649388         CDS       T03922                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105649388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105649388
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105649388
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2
Other DBs
NCBI-GeneID: 105649388
NCBI-ProteinID: XP_012091409
UniProt: A0A067JLC5
LinkDB
Position
Unknown
AA seq 657 aa
MSRSQIGYLVPLKVNLEEDTSLPKLPLSKGSNTIGRSHVSVPDKRLSRNHLTVTASIDGS
LNLTPEGTNPVVVKSGNLRRKLNPGEQLSIASGDIIELIPGHHFFKYVASSSHSSNSNSS
SPNTPKRHCNNDGGEIIKSDPPSRKKMREAPEVANRSKLETENNGQGNCEEAICKFHVPD
DKLPLIFRLLKVQGLPAWANTSCVSINDVVQGDILVAILSNYMVDVDWLISACPTLAKIP
HVLVIHGEGDATLEHMKRSKPANWILHKPPLPISFGTHHSKAMLLIYPRGVRIIVHTANL
IYVDWNNKSQGLWMQDFPWKDEKSQSKGCGFENDLVDYLHALKWPEFPVKLPALGNFTMN
PSFLKKFDYSSAAVRLIASVPGYHAGANLKKWGHMKLRSVLQECIFGKEFKNSPLVYQFS
SLGSLDEKWMTELATSMSSGLSEDKTPLGLGEARIIWPTVEDVRCSLEGYAAGNAIPSPL
KNVEREFLKKYWSKWKATHTGRCRAMPHIKTFTRYNGQKLAWFLLTSANLSKAAWGALQK
NNSQLMIRSYELGVLFLPSPYKIHAYGFSCVDNEVLSKDKCGVLADSEVLRTKLVTLAWQ
GTKDSSCEVIPLPVPYELPPQPYSSEDIPWSWDRRYTKKDVYGQVWPRLVQLYTSQH
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctcgctctcagattggttatctggttcctctgaaagtaaatttagaggaggacact
tcgcttcctaagctacctctttccaaaggctctaacaccatcggccgcagccacgtttcc
gtccccgataagagactcagtcgcaaccacctcactgtaaccgcctctattgatggttct
ctcaatttgactcccgagggtactaatccagtcgtggttaaatctgggaatctaagaagg
aagctgaatcctggagagcagttgtctattgctagcggtgatattatagagctaatacct
ggccaccatttctttaagtacgtggcttcgtcttctcacagcagtaatagtaattcatct
tctcctaatacaccaaagagacattgtaataatgatggtggagaaatcatcaaaagcgac
ccacctagtagaaagaagatgcgagaagcacctgaagttgctaaccgctctaagttggag
acagaaaataatggacaaggaaactgtgaagaggctatttgtaaatttcatgttcctgat
gataaattgccgttgatcttccggcttttgaaagtgcaagggcttccggcttgggcaaat
acctcttgcgtttctataaatgacgtggttcagggggatattcttgttgctatcctttca
aactacatggtggacgttgattggttgatttctgcatgtccaacactagctaaaattccc
catgtcttggttattcatggggagggtgatgctacgctcgaacatatgaagagaagcaag
cctgcaaattggattctgcataaacctccactgcctatttcatttgggacacaccattcc
aaggccatgcttctcatctatcctcgaggagttagaatcattgtgcatacagcaaactta
atatatgttgactggaacaacaaaagccaaggtctatggatgcaagatttcccttggaag
gatgaaaagagtcaaagcaaaggatgcggatttgaaaatgacttggttgattatctccac
gctttaaagtggccagaattccctgttaagctacctgcccttgggaacttcactatgaac
ccatcctttttaaagaagtttgattacagcagtgcagcagttaggttaattgcatctgtt
cctggatatcatgctggtgccaacctaaaaaaatggggacatatgaagttaagaagtgtt
ctccaggaatgcatttttggaaaggaatttaaaaattctcctcttgtctatcagttctct
tcccttggttcgttggatgaaaagtggatgacagagctggctacctcaatgtcttctgga
ctctcagaagataaaacgcctcttggccttggagaggctagaataatatggcctactgtg
gaagatgtcagatgctcgttagagggttatgctgctggaaatgctattccaagcccatta
aagaatgtagagagagaatttctgaagaagtattggtcaaaatggaaggctacccacact
ggccgctgtcgtgcaatgccgcatataaagacattcacgcggtataatggccagaaactt
gcttggtttctgctgacttcagctaatctaagcaaagcagcttggggggccttgcaaaag
aataattctcagttgatgattcgttcctacgagctcggtgtgctctttctaccatctccc
tataaaatacatgcttatggattttcttgcgtagacaatgaagttctatccaaggataaa
tgtggagtattagcagattctgaagtgctgagaacgaaactagtgactttggcgtggcaa
ggaactaaagattcatcatgtgaagtgattccactaccagtgccttacgagctccctccc
caaccatactcctctgaagatattccctggtcttgggacagacgatataccaagaaggat
gtttatggccaagtttggcctaggcttgtacagctttatacttctcaacattaa

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