Jatropha curcas (Barbados nut): 105649454
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Entry
105649454 CDS
T03922
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1 isoform X1
KO
K14485
transport inhibitor response 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105649454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105649454
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105649454
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
DUF1146
Motif
Other DBs
NCBI-GeneID:
105649454
NCBI-ProteinID:
XP_012091485
UniProt:
A0A067JMY2
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MDRNSKRKKESLELPIESTRSSPFPDEVLERVLGLLKSTKDRSSVSLVCKDWYNAESWSR
THVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPRNWGADIQSWLLVFASKYP
FLEELRLKRMSITDESLEFLAFNFPNFKALSLLSCDGFSTDGLAAIATHCKNLTELDIQE
NGIDDKSGSWLSCFPENFSSLEILNFANLNSEVNFDALERLVTRCKSLKVLKVNKNISLD
QLQRLLVGAPQLTELGTGSFSQELSTQQYTDLENAFSHCKNLDTLSGLWEAMALYLPVLY
PACTNLTFLNLSYAALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEAVGSHCPLLEELRV
FPADPFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLC
IMNPGQPDYTTNEPMDEAFGAVVKTCNKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKVTMNGCRL
LAREMPRLNVEVMKEEWSDDSQADKVYVYRSVAGPRRDAPPSVLTLSGSAEKASLDMQFI
FVM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtaattcgaagaggaagaaggaatcgctggagttgccaatcgagtcaactcgg
tcatctccatttcctgacgaggtactagaacgcgttctgggactactgaaatctactaaa
gaccggagctcggtttctctggtatgcaaggactggtacaacgctgagagctggtcgcga
actcatgtttttattggtaattgctactcagtttctcccgagatcgttgctcgtcggttt
ccgaaaatccgcagtgttacccttaaagggaaaccgagattctcggacttcaatttggtc
cctcggaattggggtgctgatattcagtcttggctgcttgttttcgcctccaaatatcca
tttctggaggagcttaggcttaaaagaatgtctattactgacgagagcttagagtttttg
gccttcaactttcccaactttaaagctctctcgcttttaagctgtgatgggttcagtacc
gatgggcttgcagccattgccactcattgcaagaatttgactgagcttgacatacaggag
aatggtattgatgacaagagtggcagttggctgagctgctttcctgaaaacttctcatca
ttggaaatattaaactttgccaacctaaatagtgaagtcaattttgatgcccttgagaga
cttgtgactaggtgcaaatcattaaaagtcctgaaggtcaacaaaaatatttccttggac
caactacagaggctgctcgtcggtgccccacagttaacagagcttggtactggctctttc
tcacaagagctgtctacccagcagtacactgatctcgaaaatgcattcagtcattgtaag
aacctagataccctttctggtttatgggaagcgatggcactatatttaccagttctctac
cctgcttgtacaaacttgaccttcctaaatttgagctatgctgctttgcaaagtcttgaa
cttgataatcttcttcgtcactgcccacaacttcgccgactatgggtcctggacactgtg
gaggacaaagggctggaggctgttggatcacactgccctttgctggaggaactccgtgta
ttccctgcggatcccttcgatgaggaaattatacatggggtgaccgaagcagggtttgtt
gctgtgtcttatggttgtcggagacttcactatgttctctacttttgccggcagatgacg
aatgctgcagtagctacaattgtgcaaaactgtccaaacttcactcacttccgtctctgc
ataatgaatcctggtcaaccagattacacgacaaatgaacccatggatgaggcttttggt
gcagttgtgaagacttgcaataaacttcagagactttcagtttcaggtctcttgacagac
ctgacattcgagtatattgggaggtatgcaaaaaatttggaaactctttccgtagctttt
gctggcagcagcgactgggggatgcagtgtgtactaggaggttgtccaaagttgagaaaa
cttgagataagggattgcccatttggaaatgcagctcttctctcaggtttagagaagtat
gaatctatgaggtcactttggatgtcatcctgcaaagtgacaatgaatggctgtcggcta
ttggcaagggaaatgcctagattgaatgtggaggtaatgaaggaagaatggagcgatgac
agtcaggctgataaagtttacgtttaccgttctgttgccggaccaagaagagatgcccct
ccttctgtcctcactctttcaggttctgcagagaaagcttcattggatatgcaattcata
tttgtgatgtga
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