Jatropha curcas (Barbados nut): 105649472 Help Entry 105649472         CDS       T03922                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03040   Spliceosome Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105649472  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:jcu03019]     105649472    03041 Spliceosome [BR:jcu03041]     105649472 Messenger RNA biogenesis [BR:jcu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      105649472 Spliceosome [BR:jcu03041]  Complex B   Other components    Prp19-related factors     105649472  Complex C     105649472 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_19 ARM_TT21 UTP6_C ARM_TT21_C PPR Motif Other DBs NCBI-GeneID:  105649472 NCBI-ProteinID:  XP_012091512 UniProt:  A0A067JAQ5 LinkDB All DBs Position Unknown AA seq 913 aa AA seqDB search MSIPRELYPSQDDLLYEEEILRNPFSLKLWWRYLIARREAPFKKRFIIYERAVKALPGSY KLWHAYLTERLDIVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQSLTNQKLITR TRRSFDRALCALPVTQHDRIWELYLRFVSQEGIPIETSLRVYRRYLKYDPSHIEDFIEFL VNSHLWQEAAERLASVLNDDQFYSIKGKIKHTLWLELCDLLTRHAKEVSGLNVDAIIRGG IRKFTDDVGTLWTSLADYYIRRGLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESMV AYKLDLDLSDEEENDDDAKQEEDIRLEVNSKFEKKILKGFWLHDDNNVDLMLARLEYLMD RRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWI AFAKLYENHNDLVNARVIFDKAVQVNYKTVDNLASIWCEWAEMEIRHKNFKGALELLRRA TAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEEGLGTLESTRAVYERILDLRIA TPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERA RELFEHAIEMAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNSEKLEMYKIYI ARAAEIFGVPKTREIYEQAIQEPGGLPDKDVKTMCLKYAELEKSLGEIDRARAIYVYASQ LADPRTDADFWNKWHEFEVQHGNEDTFRDMLRTKRSASASHSQQHILPEYLMPKDQRLDI DEAKDKLKQAGVPEDEMAALERQLAPAAINTTTKDSNRKVGFWSAGVESQPDGAIKVNVN QEDIELPEESDSEDDEKVEITQKDVPSAVFGGLARKREETEKDEGGGDTGIGKDKDGESR LGALERIKRQKRA NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgtcaattcctagagagctttatccgtcccaagatgatctcttgtacgaagaggagata ttacgtaacccattcagcctcaagctttggtggcgctacctaatagcccgtcgtgaagca cctttcaaaaagcggttcattatctatgagagagctgttaaggctttaccagggagctat aagctttggcatgcctatcttactgagcgtctcgatattgttagaaacttgcccatcact cactcccaatatgaaaccctaaacaatacatttgaaagagcattggttactatgcataaa atgcctcgaatttggatcatgtacttgcaatctctaaccaaccagaaattgattactcgt acccgtaggtcttttgatagagcactctgtgcattgccagtcacgcaacatgataggatt tgggagctatatttgaggtttgtcagccaagagggaattccaattgagacttcactcagg gtttataggaggtacttgaagtatgaccctagtcatattgaggacttcattgagttcttg gtgaattcccatctctggcaagaggcagctgagaggcttgcttcagtgttgaatgacgat cagttttattctataaaggggaaaataaagcatacgttatggctagaattgtgtgatctt cttactagacatgcaaaggaggtctctggtttgaatgttgacgccattattaggggtggc attaggaagtttacagatgacgttggcacattgtggacatctcttgctgattattatatt aggaggggtttgtttgagaaggctagggatatttttgaggagggtatgactacagtggtt actgtgagagattttagtgttatttttgatgcatattcacagtttgaagagagtatggta gcatataagttggatctggacttgagtgatgaggaagagaatgatgatgatgccaagcaa gaagaggatattcgtttagaagtgaattctaagtttgagaagaagatacttaaagggttt tggttacatgatgataataatgtggatttgatgttggcccgattggagtatctcatggat agaaggccagaattagccaatagtgtacttttgcgacaaaatccacataatgtggaacag tggcacaggagggttaagctttttgagggcaatccaactaaacagatactaacttacact gaggcagtaaggacagttgatccgatgaaagcagtaggaaagcctcacactctatggatt gcttttgccaagttgtatgagaatcacaatgatcttgtcaatgcaagagtaatttttgac aaggctgtccaagtgaactataagactgttgataatctggccagcatttggtgtgagtgg gctgaaatggaaattagacacaaaaatttcaaaggtgcattggagctgttgaggcgggcc acagcagaaccatcagttgaggtcaaacgaagagtggctgctgatggcaatgaaccagtc cagatgaagttgcataagtccttgagactctggactttttatgtcgatttggaagagggc cttgggaccttggagtccactcgagcagtctatgagcgaatattggacctgagaatagcc acaccacaaatcattatcaattatgcattgctcctagaagaacacaagtactttgaagat gcattcaaggtatacgaaagaggagtgaaaatatttaagtatcctcatgtgaaagacata tgggtcacatatctttcaaagtttgtaaagagatatggcaagacaaaactggaacgagca agagagttatttgaacatgctattgaaatggctcctgctgatgcagtgaaacccttgtat cttcaatatgcaaagctggaagaggattatggtttggcaaagcgagctatgaaggtttat gatcaagcaacaaaagctgtccctaatagtgaaaaactggagatgtataaaatttatatt gcccgtgcggctgagatttttggtgtcccaaaaaccagggagatatatgagcaagcaatt caggaaccgggtggtcttcctgataaagatgtaaagacaatgtgtttgaagtatgctgaa ttggagaagagcctgggagaaattgatcgtgcacgtgccatatatgtatatgcatctcaa cttgctgatccacgaactgatgcagatttctggaataaatggcacgagtttgaggtacaa catggaaatgaggacactttccgagatatgctgcggactaaacgaagtgcttcagcaagc catagccagcaacatattttgcccgagtatttgatgccaaaggatcaaaggctggacatt gacgaggcaaaagacaaattgaaacaggctggggttcctgaagatgaaatggctgctcta gagaggcagttagctcctgcagccatcaatactacaactaaagacagcaacagaaaagtg ggcttttggagtgctggggtggaatcgcagcctgatggagcaataaaggttaatgtgaac caggaagacattgagctgccagaagaaagtgactctgaagatgatgaaaaagtggagatt acgcagaaagatgttccatctgctgtctttggcggattggctaggaagagagaggagact gaaaaagatgaaggtggaggcgacactggaatcggtaaggataaggatggtgagagccgt cttggggccttggagagaataaaacggcaaaaaagagcatga

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