Jatropha curcas (Barbados nut): 105649568
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Entry
105649568 CDS
T03922
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105649568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105649568
03036 Chromosome and associated proteins [BR:
jcu03036
]
105649568
Enzymes [BR:
jcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105649568
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105649568
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105649568
Noncanonical PRC1 (PRC1.1)
105649568
Noncanonical PRC1 (PRC1.3/1.5)
105649568
Noncanonical PRC1 (PRC1.6)
105649568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
PRR20
zf-rbx1
zf-UDP
zf-RING_6
DUF4254
zf-Nse
RAWUL
zf-C3HC4_5
zf-RING_10
zf-RING_11
ZNF512_C2H2
Motif
Other DBs
NCBI-GeneID:
105649568
NCBI-ProteinID:
XP_012091642
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MPAQKRPYDTHQQDDDLLLQDLPNNRHEQQQQPLPDDDDNDGGADESDRSPSSSNEEEKE
EYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA
SRRSLRDDPNYDALIAVLYPDIDKYEKEELAFHEEEKARNKQIQASIAQTFRRQAEALGR
KRTTARNTVHTFARRTPGRCRDPNSRGRRNHRTADIQGSDDNGDANCDGSKDSSSAEEHS
VEVKSKRYKRWGGGRSKAANADGGGDENDSELNRESMGSCAGLVGPSERLAWGKGGMRSH
TRYGSANAGNGKNARNSRISKLAEYLRNLEETDNEKDIHLMLVSFDDQRIPSLQRPYLRC
KPTFSVKQLSQYVALQTALQVDEVEIYLVKELNSKLNTSSSTNVSVSKPSVIDPCKDKLQ
VLEEQETLAGLRTYNSTQGHLLLAYQKKL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaaacgtccctatgacacccaccaacaagacgatgatcttctgctgcaa
gacctccccaacaaccgccatgaacagcagcagcagccgcttcctgatgatgatgataat
gatggcggtgctgatgaatctgatcgaagcccatcttcgagtaatgaagaagagaaagaa
gaatatgttgtagtgaagctgtccgaaatacgcaaggaagtacagtgtccaatctgtcta
gggatcattcgaaaaaccaggacagtaatggaatgcctgcatcgcttctgcagggaatgc
atagacaaatctatgcggcttgggaacaatgagtgccctgcttgccgcacccattgcgcc
agtcgtcgttctttgagagatgacccaaattatgatgcattaattgctgtgttgtatcct
gatattgacaaatatgagaaagaggaattagcatttcatgaggaggagaaggcacgcaat
aagcagatccaagcttctattgcccagacttttcgccgacaagcagaagctcttggcagg
aaaaggacaacagctagaaacacagtacatacatttgcaaggagaacaccaggccgttgc
cgagatcccaactcaagaggaaggagaaatcatcgaacagctgatattcaagggtctgat
gacaatggagatgcaaattgtgatggaagcaaagattcatcgtctgctgaggagcacagt
gtagaagttaaatcaaaaagatataagagatggggaggtggtcggtccaaagctgctaat
gcagatggcggtggagatgaaaatgactcagaattgaatagggaatccatgggatcctgt
gctgggcttgttggcccctcagaaaggcttgcctggggcaaaggtggtatgcggagtcac
acaagatatggcagtgcaaatgctggcaacggaaagaatgcccgaaacagtcgtatctct
aagttagcagagtatcttcgaaacttggaggaaactgataatgagaaggatatccacctc
atgcttgtttcttttgatgatcaaagaatacccagtttgcagcggccatatcttcgctgc
aagccaactttttcagtcaaacagctatctcagtatgttgctctccaaactgctctgcaa
gtagatgaagttgaaatatatctggtgaaagagttaaattcaaagcttaatacttcatcc
tcaacaaatgtatcagtttctaagcctagtgtaattgatccatgcaaagacaagttgcaa
gttttagaagagcaagaaactctggcagggcttagaacgtataattccactcaagggcat
ctgcttttggcgtatcagaaaaagctttag
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