Jatropha curcas (Barbados nut): 105649750
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Entry
105649750 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105649750 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105649750
Spliceosome [BR:
jcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105649750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NELF-A_N
Motif
Other DBs
NCBI-GeneID:
105649750
NCBI-ProteinID:
XP_012091896
UniProt:
A0A067JMJ5
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MYRNKIETTFKGSEFVEEMEEQISNAETERHLMEGEATVVLDKIKLREVIANGSLDFDEW
TSLIVEIEKTYPENIETICLVYDAFLSEFPLCCVYWRKYVNHKIRLCTIDKVLEVFERAV
SLATYSVDVWVDYCNFGRAVFEDPSDVRRLFKRALSFVGKDYLCHTLWDKYIEFEFSLKH
WSFLADIYIQTLRFPTKKLHRYYDSFKKLVEIWKDEMESHGLLNTTISVEPMLDSEASIC
SNQDDISCIIKDLLDPSAGLERSKALRRYISVGEQFFHEASQLNENISCYETRIKRSYFH
VKPLDVNQLENWHHYLDFAESHGDFDWAVRLYERCLIPCANYPDFWMRYVEFMESKGGRE
IANFALDRVTQNFLKRVSVIHLFNARFKEHVGDVPSARSAFLQCNNESDSEFVENVVMRA
NMEKRIGNFIAASNIYEEALGMATVKEKWHVLPILYVNFSRLKYMNTDGEDAARDILIDG
IKHAPYSKLLIEELIKFAISHGGIRHMNMVDTIVANAISPRPSVSLGLSAKDGEEISKLY
LEFVDLCGSIHDVRKAWNRHIRLFPQSVRATLFHPATGTKQWKIVMEAQAESPVRLDFHP
SGDGSSDCLMQSSVQEEKLSSPKSHDTKAAHPPTDQVSDQKSRLEGKQDIICDQVPFQEP
ALLEIVKELSETDQAIVHQTKVELHQSGESDKNVNEIVDQGSLDVLELSEKDVLESNPSL
DLKHQAANDSEITPPSMEFPKEYDVQIEYDHEPELDLKPPSLEQLSLNNENAKSPDSISP
ASCDSGAHREISLSDGSMPNNEAPQKNSMSHENMSECGQNADDDRITSSPGSSQAAVSAQ
TNIGYVSPTSSASYQNKAQALLQPQKMADDGRNWHQKNNPDRSRRDSKLGFRGHSHKRQQ
KQGQSSPQRTRMRDEKEPQIHMNEDYASQPWSLRDLQVQQAGQVQSWYPASTVHINQTTP
QAWPVYNMQQQSISPACQSQPPVQPAAYPQPQMTQHPIQSSEQPCNAQNNQAYNQMWQHY
YYQQQQQLLWQQQQLLKHQQPNKQQLLQQYQQQFRQQQYQQQLIQMQQQQQGQQLQPQQQ
QQQQVQQLQQQQGQLQQQQAYQLQQQSYQQQQHLLYLQHQQQVQQQQLLLQQQHFHQQQT
ALPQQHPHEQGQDQELPKKQNNTSQVQVSV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaataaaatcgaaacaacttttaaaggatcggaatttgtcgaagagatggag
gaacaaatttcaaacgctgaaacagagcgccacttaatggaaggggaagctactgttgtt
ttggacaagatcaaactacgtgaagttattgctaatggctcattagactttgatgagtgg
acttcacttatagtagagattgagaaaacttatcctgaaaatatagaaacaatatgctta
gtgtatgacgctttcttgtctgagtttcctctgtgctgtgtttattggaggaagtatgtt
aatcacaagatacgcttgtgcactattgacaaggttcttgaagtctttgagcgagctgtg
tcattggcaacttattctgttgatgtgtgggttgactactgtaattttgggagagcagtt
tttgaagatccatctgatgttcgcagattgttcaaaagagccttatcctttgttggaaag
gattatttatgccataccttgtgggataaatacattgagtttgagttctctcttaagcat
tggagcttcctagctgacatttacattcaaacattgaggtttccaaccaagaagttgcat
cgatattatgatagttttaaaaagttggtggaaatatggaaagacgaaatggaatctcat
gggcttttgaacacgacaatatcagtagaacccatgcttgatagtgaagcttctatatgt
tctaaccaagatgacatttcctgcatcattaaggacctgctagatccgtctgctggctta
gaaaggtcaaaagcacttcggagatatatatctgttggagaacagttttttcatgaagca
tctcagttaaatgaaaatataagttgctatgaaactcgtattaagagatcttatttccat
gtcaagccacttgatgtcaatcaattggaaaactggcatcactatctggactttgctgag
tcgcatggagatttcgactgggctgttagactttacgaaagatgcttaatcccttgtgct
aattatccggacttctggatgcgttatgtggagttcatggaaagtaagggaggaagagag
atagcgaactttgcactggaccgagtgacacaaaactttctgaagagggtgtcagtgatt
catctgttcaatgccaggtttaaggagcacgtaggagatgtgcctagtgcccgttctgcc
tttcttcaatgcaacaatgaatcagattcagaatttgttgaaaatgttgtaatgagagct
aacatggaaaagcgcatagggaatttcatagcagcttctaatatatacgaagaagcactg
ggaatggctacagtgaaggaaaagtggcatgttcttcctattttgtatgttaacttttct
cgacttaaatacatgaatactgatggtgaagatgctgccagagatatcttgatagatgga
atcaagcatgcgccttacagtaaattacttatagaggagttaataaaatttgcaatttca
catggagggataaggcatatgaacatggtagataccattgtagcaaatgctatatctcca
cgaccaagtgtatctctaggtttgagtgcgaaagatggggaggaaatatcaaaactctat
ctagagtttgttgatctatgtggatctatccatgatgtaagaaaggcatggaatcggcac
atcagattgttcccacagtctgtaagggctactttgtttcatcctgctacaggaacaaaa
caatggaaaatagttatggaggcacaagcagaaagccctgtcagactggattttcatcct
tctggagatggcagttctgactgcctgatgcagtcatcagtacaggaggaaaaactgtcc
tcacccaaaagtcatgataccaaggctgcccatcctcccactgaccaggtgtcagaccag
aaatcacgactggagggaaaacaagatataatatgtgaccaggtacctttccaggagcca
gcattgctggaaattgtaaaggagttatcagaaactgatcaggcgattgtacatcagaca
aaagttgaactgcatcagtctggagaatctgacaagaatgtaaatgagattgtggatcaa
gggtctctcgatgtgctagagctgtctgagaaagatgttcttgaatcaaatccatctctt
gatttgaaacatcaagctgctaatgattcagaaattactccaccctctatggaatttcct
aaggaatatgatgttcagatagagtatgaccatgaacctgaactggatttgaagccgcct
tcactggagcaactttccttgaataatgagaatgccaaatctccagattctatcagtcct
gcatcttgtgattctggagctcatcgggaaattagcttgtctgatggaagtatgccaaat
aatgaagctcctcagaaaaatagtatgtcacatgaaaatatgtcagagtgtggccagaat
gctgatgatgatcgtattacatcgagcccagggagcagtcaagcagctgtgtctgcccaa
acaaatattggatatgtcagtcctacatcttctgcaagctatcagaacaaggcacaggca
cttctgcaaccacagaaaatggcagatgatggtagaaactggcatcaaaagaataatcct
gacagatctcgccgagattccaaacttgggtttcgtgggcattctcataaaagacagcaa
aaacagggtcagtcttctccacaaagaacacgcatgcgagatgaaaaagaacctcaaatt
cacatgaatgaagattatgcatctcaaccttggtctttacgagatctgcaagttcagcaa
gctggccaagtacaaagttggtatccagcatctactgttcatattaatcaaactacacct
caagcttggccagtgtataatatgcaacagcaaagtatttcccctgcatgtcagtctcaa
ccacctgtacaacctgctgcatatcctcaaccacagatgactcaacatcccatacaaagt
agtgagcaaccctgtaatgcacaaaataaccaagcgtataaccaaatgtggcaacattat
tactaccagcagcaacagcagcttctttggcaacaacagcagctcctgaaacaccaacag
ccaaacaaacagcagctcttgcaacaatatcaacagcagttccggcaacaacaatatcaa
cagcagttgatacaaatgcagcaacaacagcaaggacaacagctgcaaccacagcagcag
cagcagcaacaagtgcaacaactccagcaacaacaaggacaactgcaacagcaacaagcc
tatcaattgcagcaacaatcctatcagcagcagcagcatctactctatcttcagcatcaa
cagcaagtgcaacaacagcagttattgctacaacagcaacactttcaccagcaacaaaca
gccttaccacaacagcatccacatgaacaaggacaagaccaagaattgcccaagaagcaa
aataacacatcacaggttcaggtgagtgtatga
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integrated database retrieval system
