Jatropha curcas (Barbados nut): 105649818
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Entry
105649818 CDS
T03922
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105649818
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105649818
REST complex
105649818
Heterochromatin formation proteins
Other heterochromatin formation proteins
105649818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
MC7
Motif
Other DBs
NCBI-GeneID:
105649818
NCBI-ProteinID:
XP_012092006
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MKRSRDDIFIASQIKRPMVSSRGETSGQPQMMGGGAASSAGGGGGGSGQKLTTNDALAYL
KAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGY
EITLPLEDEQHEQPPQKKPVEFEEAINFVNKIKTRFSGENSVYKSFLDILNMYKNENKSI
TEVYQEVASLFQDHNDLLMEFTHFLPDSSATASHYPPSVRNSLLRDRSSAIPTLRQMQVD
KKERTTASHAADRDFSVDRPDPDHDRSLVRMDKEQRRRGEKDKERRDREDRDYEQDGSRE
FNTQRFPHKRKVARRLEDSAAEHQGGDGDENFGMHPISSTYDDKNAVKNALSQELAFCEK
VKEKLRNPDDYQGFLRCLHLYTREIITRTELQSLVSDLLGKYPDLMDGFNEFLARCEKNE
GLLAGVVSKKSLWNDGNLPRPVKLEDRDREREDGVKDRERETREREKLDKNVAFGNKDTG
GHKMPLFSSKDKYLAKPINELDLSNCERCSPSYRLLPKNQYPIPSASQRTVLGAEVLNDH
WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNV
IKTESPIHIEEHLTALNLRCIERLYGDHGLDVMDVLRKNTSLALPVILTRLKQKQEEWAR
CRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLL
AFAAGNRRPIIPNLEFEYPDPDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLG
VPSRPQGAEDTEDVVKAKNHSSKVGDGEGSPNGAGATGINKHSNPSRNGDESIPPEQSSS
CRAWLNGDNGVKENGSPDADRIARKSDASCSTVQHDKMQINAASADEISVVGKQVTSNER
LVNSNTSLVTGAEISNGRTNMESGLSAAPSRPSNGSLNGGLGLGSSNEILPSAEGGDFSR
PTISTNGVAAEGVKNHRYTDESAAQFKIEREEGELSPNGDFEEDNFAAYGEAGLEGVHKG
KETVASRQYQTRHGEEETCGEAGGENDADADDEGDESAQRTSEDSENASENGDVSGSESG
DGEECSREEHEEDGEHDEHDNKAESEGEAEGMADAHDVEGDGTMLPFSERFLLNVKPLAK
HVPPALHDKEKGSRVFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWKTSNDTSPTD
LYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQTAASDEMD
NKLLQLYAYEKSRKPGRFVDIVYHENARVLLHDENIYRIECSSEPTHLSIQLMDFGHDKP
EVSAVSMDPNFAAYLHNDFLSIVPDKKEKPGIFLKRNKNKCWSHDECQAMEGFQVFNGLE
CKIACTSSKVSYVLDTEDFLFKTKRRRKTLQQSSSCHDQTYTSKRLQQFHRWLSSS
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcgagagatgatattttcatcgcctctcaaattaaaaggcctatggtgtct
tctcgtggagaaacttctgggcaaccccagatgatgggaggaggagcagccagtagtgct
ggaggaggcggaggcggaagtgggcaaaaacttacaacaaatgatgccttggcatatctc
aaggccgtgaaggacatatttcaagataaaagggaaaaatatgatgactttcttgaggtc
atgaaagatttcaaggctcaaagaattgacactgctggtgtcatagcaagggtgaaagag
ttatttaaagggcatcgtgacctaattttaggattcaatactttcttgccgaagggatat
gagatcaccctgcctttagaggatgaacaacatgaacaacctccacagaaaaagcctgtt
gaatttgaagaagcaattaattttgtaaacaaaattaagacaaggttttcaggtgaaaat
agtgtttacaaatcgtttttagacattttgaacatgtacaaaaatgaaaataaatccatc
actgaggtctaccaggaggttgcttcactctttcaagaccataatgatctcctgatggag
tttactcattttctacctgattcttcagctacggcctctcattatcctccatctgttagg
aattctctccttcgtgataggagctctgccattccgacattgcgccaaatgcaagttgat
aagaaagaaagaactactgcttctcacgctgctgatcgcgacttcagtgttgaccgtcct
gatccagaccatgatagatctctggtaagaatggacaaagagcaacggagacgtggtgaa
aaggacaaggaaaggagagatcgagaagatagagattatgagcaagatggcagtcgtgag
ttcaacacacaacggtttccccacaaacgaaaagttgctcgaaggcttgaagattcagct
gctgaacatcaaggtggggatggggatgaaaactttggaatgcatcccatttcatccact
tatgatgataaaaatgctgtgaaaaatgcacttagccaagagcttgctttttgcgagaaa
gtgaaggaaaagttgcgtaatcctgatgattaccagggattcctcagatgtcttcaccta
tataccagggaaataatcacaagaacagagttgcaatctctggttagtgatttacttgga
aaatatccagatcttatggatggcttcaatgaatttttggcacgttgtgagaagaatgaa
ggtcttcttgctggtgttgtaagtaaaaaatcattgtggaatgatggtaatttgcccaga
cctgtgaagttagaggatcgtgatcgtgagagggaagatggggttaaagatagagaacgc
gaaacacgggaaagagagaaactagacaaaaatgtggcctttggcaataaagatacaggg
ggtcataagatgcctttgttttccagcaaggacaagtatttggcaaagcccattaatgaa
ctggacttgtctaactgtgagcgttgcagtcccagctaccggcttctgcctaagaatcag
tatcccataccttcagcaagccagaggacagtgcttggtgctgaagtactgaatgatcat
tgggtatctgtcacttcaggaagtgaagattactcttttaaacacatgcgcaaaaaccaa
tatgaagaaagcctatttcgatgtgaagatgacaggtttgagctggacatgttgttggaa
tctgtgaatgtgacgaccaagcgagtagaagaattgttagaaaagatcaacaacaatgtg
atcaaaacagagagtccaattcatattgaggagcacttgacagctctgaatttgaggtgt
attgaacgtttgtatggtgaccatgggcttgatgtgatggatgtgttaagaaagaacact
tctcttgctttgccagttatattaactcgtctgaagcagaagcaagaagagtgggcaagg
tgtcgtgctgattttaacaaagtttgggctgaaatttatgctaaaaactatcacaagtcc
cttgatcatcgtagcttctatttcaagcaacaggacacaaagagcttgagcactaaagcc
ttattggcagagatcaaagaaatcagtgagaagaaacgcaaagaagatgatgtgcttctt
gcttttgctgctggaaacagacgacccattataccgaatttggagtttgagtacccagac
cctgacattcatgaagatttatatcagctcatcaaatactcttgcggtgaggtttgtaca
accgaacagttggacaaagtgatgaagatttggactaccttcttggaacccatgcttggt
gttccttctcgtcctcagggtgctgaggacactgaagatgtggtaaaggcaaaaaatcat
tcttctaaagttggagatggtgaaggcagccctaatggtgctggtgctacaggcatcaat
aagcattctaatccttctagaaatggtgatgaaagtatcccacctgagcaatcaagttct
tgcagggcttggttgaatggagataatggggttaaagaaaacggttctccagatgctgat
cggatagctcgtaagagtgatgcatcatgcagtactgttcaacatgataagatgcagatc
aatgcagcctcagctgatgaaatttcagttgtgggcaaacaagttacttccaatgaacga
ttagtcaattcaaacacttcacttgtcactggagcagagataagcaatggaagaactaac
atggaatcagggcttagtgctgctccatcaagaccaagtaatggtagccttaatggtggg
cttggattaggttcaagcaatgaaattttaccttcagcagagggtggtgatttttcgaga
ccgacaatatccacaaatggggtggcagcagaaggtgtcaagaatcacagatatactgat
gaatctgctgcacagtttaaaattgaaagagaagagggtgaattatctccaaatggggat
tttgaggaggataattttgcagcttatggagaagctggtttggagggtgtacataaggga
aaggaaactgttgcaagtaggcaataccaaacaagacatggagaggaagaaacatgtggc
gaggcaggaggagaaaatgatgctgatgctgatgatgaaggggatgaaagtgctcagagg
acatcagaagacagtgagaatgcctcagagaatggtgatgtttccggaagtgagtctgga
gatggtgaagagtgctcgagggaagagcatgaggaagatggagaacacgatgagcatgat
aacaaagctgaaagtgaaggtgaagctgagggaatggctgacgcccatgatgttgaagga
gatggtacaatgttgccattttcagaacgttttcttctgaatgtgaagcctctagcaaag
catgtacctccagcattgcatgacaaagaaaagggatcccgggttttctatggaaatgat
tctttctatgtgctttttcggcttcaccaaacattgtatgaaagaatacaatcagcaaaa
attaattcatcttctgctgaaagaaagtggaaaacttcaaacgatacaagtccaactgac
ctctatgcaaggtttatgagcgctctttacaatttacttgatggttcttctgataataca
aaatttgaggatgattgccgagctattattggaacacaatcatatcttctattcacattg
gacaagttgatctataaacttgttaaacagctccaaacagcagcgagtgatgagatggac
aacaagctgctccaactatatgcatatgaaaaatcaagaaaacctggaagatttgttgat
atagtttatcatgaaaatgcccgtgttcttctccatgatgagaacatatatcgtatagaa
tgttcttcagaacctacccatttgtctattcagcttatggacttcggacatgataagcct
gaagtatctgctgtttccatggaccccaattttgcagcttatctgcacaatgacttcctc
tccattgttcctgacaagaaagagaagcctgggatattcctgaagaggaataaaaacaaa
tgttggagtcatgatgaatgccaggccatggaaggatttcaagtttttaatggtttggag
tgcaagattgcttgcacttcctccaaagtatcctacgttttagatacagaagattttttg
ttcaaaacgaaaaggagaaggaaaaccttgcaacagagcagctcttgccacgaccaaaca
tacacttcaaaaagattacaacagttccacagatggctctccagctcatag
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integrated database retrieval system
