Jatropha curcas (Barbados nut): 105649841
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Entry
105649841 CDS
T03922
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03410
Base excision repair
jcu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105649841
03450 Non-homologous end-joining
105649841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105649841
Enzymes [BR:
jcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105649841
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105649841
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105649841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
PTCB-BRCT
HHH_5
NTP_transf_2
MAJIN
Motif
Other DBs
NCBI-GeneID:
105649841
NCBI-ProteinID:
XP_012092039
UniProt:
A0A067JBU8
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MARKTTKNEMRSPDPNGIFSGMVVVLVENGVQSRRLQIWKQKLVQMGATIETRLSKKVTH
VFAMNSNALLQQMDKERLQRFRGKVLLYQWLEDSLRLGEKVSEDPYHVEVHLEEKSDQSK
PLVRKSTNGNTSSSNESSPQKKIKSSLEDAKNFKADARAYAENNAVDVAPNSPRSSDGSP
LTLSPTSSSPKTSSSPSKYSSLAYCPPDLNRNITEIFGKLINVYRALGDDRRSFSYYKAI
SVIEKLPFKIESADQVKDLPGIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTITLFGEV
WGVGPATALKLYEKGHRILDDLKNDDSLTHSQKLGVKYFDDIKTRIPRNEVREMEQLLQK
SGEEILPGVVIICGGSFRRGKASCGDLDVVITHPDGISHKGFLPRYVKKLKDMKFLREDL
VFSVHSEQGTDSGVDTYFGLCTYPGREMRHRIDFKVYPRDIYAFGLIAWTGNDVLNRRLR
LLAESKGYRLDDTGLFPAISGGKRGAKATASLRFDTEKEVFDFLGFPWLEPHERNL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaagacaactaaaaatgaaatgcggtctcctgatccaaacggaattttctct
ggaatggtcgtcgtcttggtcgaaaacggggttcagtcacgccggttacagatctggaag
caaaagttggtacagatgggagctactattgagactcgcctgtcaaaaaaggtgactcat
gtttttgctatgaattcaaacgcgcttctccagcaaatggacaaagaacggttacaacga
ttcagaggaaaagtgctcctttatcagtggctagaggacagtttaagattaggagagaag
gtatctgaggatccataccatgtggaagttcatctggaggaaaaaagcgatcaaagcaag
cctctggtaaggaaatcaaccaatggaaacacttctagtagtaatgaatcatcacctcag
aaaaagatcaagtcttctctcgaggatgccaaaaatttcaaagcagatgctagggcatat
gcagaaaataatgctgtagatgttgcacccaatagtccgagaagttctgatggctcaccc
ctcaccttgagccctacaagttctagtccaaagacttctagcagtccaagcaaatattca
tcattggcatactgtccacctgatctaaacaggaacatcacagaaatttttgggaaacta
atcaatgtatacagggcgttgggtgatgatcgaaggtcatttagctattacaaggctatt
tcagttattgagaagttgccattcaaaattgaaagtgcagatcaggtcaaagatctacct
gggattggaaaatcactgcaggatcatatacaggagatagtgactactggcaagttgtcc
aagttggaacattttgaaacagatgaaaaggtgcggacaattactttatttggggaagtt
tggggtgtcggtccagccactgccttaaagttgtatgagaaaggacatcgcatcctagat
gatcttaaaaatgatgactcattaacgcattcacagaagttaggcgtgaaatattttgat
gatatcaagacaaggattccgcgaaatgaggttcgagaaatggaacaacttctgcaaaaa
tctggtgaagaaatattgcctggggtggttatcatatgtggaggatcttttagacgtgga
aaggcatcttgtggggatttggatgtggtaattacacaccctgatgggataagtcataaa
ggtttcttaccaagatacgttaagaaattgaaggatatgaagttcttaagagaggacttg
gtatttagtgttcacagtgaacagggcactgactctggtgttgacacatattttggtctt
tgtacatatcccggacgggaaatgcgacatcgaatagatttcaaggtgtatccgagggac
atatatgcatttggtttgatagcgtggactgggaatgatgtattaaacaggaggttaaga
ttgttagcagaatccaaaggatacaggctggatgacactgggctatttccagctatttca
ggtggcaaacggggtgcaaaagctactgcaagcctgaggtttgacactgaaaaagaggtc
tttgatttcctggggttcccctggcttgaacctcatgaaaggaacctctga
DBGET
integrated database retrieval system