Jatropha curcas (Barbados nut): 105650088
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Entry
105650088 CDS
T03922
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105650088
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105650088
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105650088
NCBI-ProteinID:
XP_012092363
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All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MSSLAPLQVLLLYCITISLAFQAHALDSYYKPLSSYLPKNSKKILNTIDSCWRTNTKWAT
NRRALADCAVGFGKGAVGGKYGAIYVVTNPYDDPANPMPGTLRYGVIQTEPLWIIFDKDM
VITLKNELIINSFKTIDGRGAKVEIANGPCITIQGVSHVIIHGISIHDCKPGKSGMVRSS
PTHVGRRGGSDGDAIVIFASSNVWIDHCYIARSADGLIDVIHASTGVTISNNYFAHHDKV
MLLGHNDGYVADKVMKVTIAFNHFGTGLIERMPRVRFGYAHVANNRYDEWEMYAIGGSAN
PTIFSEGNYFIAPDRGFSKQVTKREAKNGWKNWKWRSSKDVFMNGAYFVQSGYGSIAPPY
SRIQSFPVAPGTMVPALTSDAGPLHCVLGKACGYSY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcattagccccgcttcaagttcttcttctgtactgtattactatttcacttgcc
tttcaagcacatgcactggactcctactacaagcctctatcaagttatctccctaaaaat
tccaagaagatcttaaacacaatagactcatgctggcgtaccaacactaaatgggcaaca
aaccgccgcgccttggccgactgcgcggtgggttttggcaaaggcgccgtgggagggaaa
tacggtgctatatacgtagtcactaatccgtacgatgacccagcaaaccccatgccggga
acccttcgttatggtgttatccaaacagaacctctatggataatttttgacaaggacatg
gtgattacacttaaaaatgagcttataataaatagtttcaagactatagatgggagaggg
gctaaagtggagattgcaaatggaccttgtataacaattcaaggtgttagccatgttatt
atacatggaataagtattcatgactgcaagccagggaaatcaggcatggttaggagtagt
cctacacatgtgggacgtcgaggaggctctgatggggatgcgattgttatatttgcttct
tcaaatgtttggattgaccattgctatattgctcgtagcgcagatggcctgatcgatgtc
attcatgcttcaactggtgtcacgatctctaacaactactttgcccatcatgataaggtg
atgttgcttggacacaatgatgggtatgtcgcagataaagttatgaaggtaacaatagcc
ttcaaccattttggcactggacttattgagaggatgccaagggtgagatttgggtatgcc
catgttgctaacaatagatatgatgaatgggaaatgtatgcaattggtggcagcgctaat
ccaaccatctttagtgaagggaactattttatagcgccagatagaggtttttcaaagcag
gttacgaaaagagaagccaaaaatggttggaagaattggaaatggagatcctctaaggat
gtattcatgaatggtgcttattttgtgcaatctggatatggaagcattgctccaccttat
tctcggattcaatcatttccagttgctcctggcactatggtccctgctttaacatctgat
gcaggtcctctgcactgtgttctcggtaaagcatgtggatattcttattag
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