Jatropha curcas (Barbados nut): 105650094
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Entry
105650094 CDS
T03922
Name
(RefSeq) protein PAT1 homolog 2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105650094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105650094
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105650094
mRNA degradation factors
5'-3' decay
Decapping complex
105650094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105650094
NCBI-ProteinID:
XP_012092372
LinkDB
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Position
Unknown
AA seq
749 aa
AA seq
DB search
MEKGIGLDSLSDMDDFASTFAKGVGLGSLSDVDDLASTFAKLNRVVTGPRNVGVIGDRGS
GSFSRESSSATDWAQDEDFSSWLDQQMFDIENSQEGKRWSSQPQPSSARFSESKPLHRTS
SYPQQQPQLQRYSSEPILIPKSNFMSFPPPGGQNQHASQDHLLAGGPQPFSNSNLSPSSN
SNLQLAAIHPGLHYRGNMPSVSSPGLSFNNRPQNHWVNHAGLLQVDHSSLLQSLLQQQLS
HQNGLISPHLISPQQQRLHNPVQPSLAHLAAMQSHLYNTHPSSAHKMMFGLSDQKHKSSH
KGRQNTRLSQQGSDASSQKSDSGLLQFRSKYMTSEEIESILKMQHAATHSSDPYVDDYYH
QARLAKRSAGSRAKHQFCPSHMKELPNRGRNSSDQQSHLHGNAAGKIPLSIHKPLPLLDA
DPPGSVDGSTEQVSERPLEQEPMLAARIAVEDAMCQLLEVDDIDRFLQFNQPQDGGAQLR
RKRQMVLEGLAASLQLVDPLGQSGKTVGLASKDDLVFLRIVSLPKGQKLICKFLQLLFPG
SDLTRIVCMAIFRHLRFLFGGIPKDSAAAETTMNLVKTVSACVNSMDLHALSACLVAVVC
SSEQPPFRPLGSPAGDGASIILKSLLERANKLLIDPQAAANCSVTNFALWQASFNEFFDL
LTKYCLIKYDTILQTVYANNPPNAEGNDLEVRAATKREMPVELLRACLPHTDERQMELLR
HFGQQRNSVTGLNAHSGNSGQMNSELVRS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggtatagggttagattctttatcagatatggatgatttcgcaagtactttt
gcaaagggtgtgggtttaggatctttatcagatgtggatgatctggcaagtacatttgca
aagttgaacagagttgtcactgggccaaggaatgtaggagttattggtgacagaggatct
ggatctttttcaagggaaagttcatctgccactgactgggcacaagatgaagacttttct
agctggttggatcagcaaatgtttgatattgaaaattctcaggagggaaagagatggtca
tcacagccccaaccttcttcagctcgtttttcagaatcgaaacctctgcacagaacatcc
tcatatccccagcagcaaccgcaactacagcgctactcaagtgaaccaattctcatacct
aaatcaaacttcatgtctttccctcctcctggtggccagaatcaacatgcttcacaagat
caccttcttgctggtggaccacagcccttctcgaattcaaacctctctccttcatccaac
tctaatcttcaactggccgccatacatcctgggttacattatcgtggaaatatgccctca
gtcagctctcctggcctttcctttaataacaggcctcaaaatcactgggttaaccatgct
ggcctattacaagtagatcactctagcctcttacagagtctattgcagcaacaattatcc
catcaaaatggcctgatctcaccacatttgatttcaccacagcagcagagactgcataat
ccagtccaaccatctttggctcatttagcagcgatgcagtcccacctttataatactcat
ccttcatcagcacataaaatgatgtttggattatcagatcaaaaacacaaatcatcacat
aaaggacggcagaatacacgtctttctcaacaaggttcggatgccagcagtcagaaaagt
gatagtggcttgttgcaattcagatccaaatatatgacatctgaagagatagaaagtatt
ctgaaaatgcagcatgctgctacacatagcagtgacccatatgttgatgattattaccat
caagctcgtcttgccaaaagatctgctggatcaagagctaaacaccagttctgcccatct
cacatgaaagaacttccaaatcgtggtcgtaacagctctgaccagcagtctcatctccat
ggtaatgctgctgggaagattcctctctctatacataaaccacttcctctgcttgatgct
gatcctcccggttctgttgatggaagcactgagcaagtctctgagaggcctctggaacag
gagcctatgcttgcagctagaattgctgttgaagatgcaatgtgccaactccttgaagtg
gatgatattgatcggttcctacaattcaatcaaccccaagatggtggggctcaactcagg
cgtaagcggcagatggtgcttgaaggattagcagcttcccttcagcttgttgatccactt
ggccaaagtggcaaaacagttggattggcttccaaggatgatcttgtgttcctgcggata
gtttctctccccaagggtcagaagctcatatgtaagttcctgcagcttcttttccctggt
agtgacctcacccgaattgtctgcatggctatattccgtcacttaagatttttgttcggt
ggcattcctaaagattcagcagcagctgagacaactatgaatcttgtcaagactgtctca
gcatgtgttaatagcatggatcttcatgcattgagtgcttgccttgttgcagtggtttgt
tcttcagagcagccaccatttagacctcttggcagccctgctggggatggtgcctctatc
attttgaaatctcttcttgagagggcaaataaactattaattgatccccaggctgcagca
aactgcagtgtaactaattttgccctttggcaggcctcatttaatgaattttttgatctt
cttaccaagtattgcctgattaaatatgacacgatactgcaaacagtctatgcaaacaat
cctcctaatgcagaaggcaatgatttagaggtgcgtgcagctacaaaacgtgaaatgcct
gtggagcttttgcgcgcatgccttccccatactgatgaacgccagatggagcttttaaga
cactttggacagcaacgaaattctgttactgggttgaatgcacattcagggaatagtggt
cagatgaactctgaattggtgaggagttga
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