KEGG   Jatropha curcas (Barbados nut): 105650094
Entry
105650094         CDS       T03922                                 
Name
(RefSeq) protein PAT1 homolog 2
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105650094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105650094
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105650094
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     105650094
SSDB
Other DBs
NCBI-GeneID: 105650094
NCBI-ProteinID: XP_012092372
LinkDB
Position
Unknown
AA seq 749 aa
MEKGIGLDSLSDMDDFASTFAKGVGLGSLSDVDDLASTFAKLNRVVTGPRNVGVIGDRGS
GSFSRESSSATDWAQDEDFSSWLDQQMFDIENSQEGKRWSSQPQPSSARFSESKPLHRTS
SYPQQQPQLQRYSSEPILIPKSNFMSFPPPGGQNQHASQDHLLAGGPQPFSNSNLSPSSN
SNLQLAAIHPGLHYRGNMPSVSSPGLSFNNRPQNHWVNHAGLLQVDHSSLLQSLLQQQLS
HQNGLISPHLISPQQQRLHNPVQPSLAHLAAMQSHLYNTHPSSAHKMMFGLSDQKHKSSH
KGRQNTRLSQQGSDASSQKSDSGLLQFRSKYMTSEEIESILKMQHAATHSSDPYVDDYYH
QARLAKRSAGSRAKHQFCPSHMKELPNRGRNSSDQQSHLHGNAAGKIPLSIHKPLPLLDA
DPPGSVDGSTEQVSERPLEQEPMLAARIAVEDAMCQLLEVDDIDRFLQFNQPQDGGAQLR
RKRQMVLEGLAASLQLVDPLGQSGKTVGLASKDDLVFLRIVSLPKGQKLICKFLQLLFPG
SDLTRIVCMAIFRHLRFLFGGIPKDSAAAETTMNLVKTVSACVNSMDLHALSACLVAVVC
SSEQPPFRPLGSPAGDGASIILKSLLERANKLLIDPQAAANCSVTNFALWQASFNEFFDL
LTKYCLIKYDTILQTVYANNPPNAEGNDLEVRAATKREMPVELLRACLPHTDERQMELLR
HFGQQRNSVTGLNAHSGNSGQMNSELVRS
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggaaaagggtatagggttagattctttatcagatatggatgatttcgcaagtactttt
gcaaagggtgtgggtttaggatctttatcagatgtggatgatctggcaagtacatttgca
aagttgaacagagttgtcactgggccaaggaatgtaggagttattggtgacagaggatct
ggatctttttcaagggaaagttcatctgccactgactgggcacaagatgaagacttttct
agctggttggatcagcaaatgtttgatattgaaaattctcaggagggaaagagatggtca
tcacagccccaaccttcttcagctcgtttttcagaatcgaaacctctgcacagaacatcc
tcatatccccagcagcaaccgcaactacagcgctactcaagtgaaccaattctcatacct
aaatcaaacttcatgtctttccctcctcctggtggccagaatcaacatgcttcacaagat
caccttcttgctggtggaccacagcccttctcgaattcaaacctctctccttcatccaac
tctaatcttcaactggccgccatacatcctgggttacattatcgtggaaatatgccctca
gtcagctctcctggcctttcctttaataacaggcctcaaaatcactgggttaaccatgct
ggcctattacaagtagatcactctagcctcttacagagtctattgcagcaacaattatcc
catcaaaatggcctgatctcaccacatttgatttcaccacagcagcagagactgcataat
ccagtccaaccatctttggctcatttagcagcgatgcagtcccacctttataatactcat
ccttcatcagcacataaaatgatgtttggattatcagatcaaaaacacaaatcatcacat
aaaggacggcagaatacacgtctttctcaacaaggttcggatgccagcagtcagaaaagt
gatagtggcttgttgcaattcagatccaaatatatgacatctgaagagatagaaagtatt
ctgaaaatgcagcatgctgctacacatagcagtgacccatatgttgatgattattaccat
caagctcgtcttgccaaaagatctgctggatcaagagctaaacaccagttctgcccatct
cacatgaaagaacttccaaatcgtggtcgtaacagctctgaccagcagtctcatctccat
ggtaatgctgctgggaagattcctctctctatacataaaccacttcctctgcttgatgct
gatcctcccggttctgttgatggaagcactgagcaagtctctgagaggcctctggaacag
gagcctatgcttgcagctagaattgctgttgaagatgcaatgtgccaactccttgaagtg
gatgatattgatcggttcctacaattcaatcaaccccaagatggtggggctcaactcagg
cgtaagcggcagatggtgcttgaaggattagcagcttcccttcagcttgttgatccactt
ggccaaagtggcaaaacagttggattggcttccaaggatgatcttgtgttcctgcggata
gtttctctccccaagggtcagaagctcatatgtaagttcctgcagcttcttttccctggt
agtgacctcacccgaattgtctgcatggctatattccgtcacttaagatttttgttcggt
ggcattcctaaagattcagcagcagctgagacaactatgaatcttgtcaagactgtctca
gcatgtgttaatagcatggatcttcatgcattgagtgcttgccttgttgcagtggtttgt
tcttcagagcagccaccatttagacctcttggcagccctgctggggatggtgcctctatc
attttgaaatctcttcttgagagggcaaataaactattaattgatccccaggctgcagca
aactgcagtgtaactaattttgccctttggcaggcctcatttaatgaattttttgatctt
cttaccaagtattgcctgattaaatatgacacgatactgcaaacagtctatgcaaacaat
cctcctaatgcagaaggcaatgatttagaggtgcgtgcagctacaaaacgtgaaatgcct
gtggagcttttgcgcgcatgccttccccatactgatgaacgccagatggagcttttaaga
cactttggacagcaacgaaattctgttactgggttgaatgcacattcagggaatagtggt
cagatgaactctgaattggtgaggagttga

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