Jatropha curcas (Barbados nut): 105650443
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Entry
105650443 CDS
T03922
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105650443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105650443
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105650443
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105650443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105650443
NCBI-ProteinID:
XP_037491667
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQLSDQALVRCEYSMAN
FSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLQADGGTRSACIN
AATLALADAGIPMRDLVTSCSSGYLNNTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQ
MDAKLPVEIFENVMQLAIEGCKAIAKYIGEVLLENTKQLEYRRSL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaggcaacttcgagcgcagattggtgccgtcgccaaggcagatggttctgct
gtttttgagatgggtaatactaaagtaattgctgcagtgtatgggccaagagaggttcaa
aataggagccaacagctcagtgaccaggcattggtacgatgtgagtacagcatggctaat
tttagtactggagatcgcatgagaaaaccgaagggtgacaggcgatcaacagaaatatct
ctagttattcgtcagacaatggaggcatgcatattgacacacttgatgcctcgttctcag
atagatatttatgtgcaagttcttcaagctgatggaggaactagatctgcatgtatcaat
gctgcaactttggccctggctgatgctggaatccccatgcgcgatcttgtcacttcttgt
agttctggatacctcaataacactcctttgcttgatttgaattatgtagaagacagtgca
ggaggtccagatgttacagttggaattttacctaagttggataaagttactctccttcag
atggatgctaagttgccagtagaaatctttgaaaatgttatgcaacttgctattgaaggc
tgcaaggcaatcgcgaagtacattggagaagtgttattggagaataccaagcaactagaa
taccgaagaagcttatag
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