Jatropha curcas (Barbados nut): 105650644
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Entry
105650644 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105650644
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jcu01002
]
105650644
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105650644
03036 Chromosome and associated proteins [BR:
jcu03036
]
105650644
Peptidases and inhibitors [BR:
jcu01002
]
Metallo peptidases
Family M1
105650644
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105650644
Coactivators
SAGA/TFTC/STAGA complex
105650644
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105650644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
105650644
NCBI-ProteinID:
XP_012092956
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MAKPRKPKNEDAKPDNSGAVVRHQKLCLSIDMDKRQIYGYTELEIAVPDIGIVGLHAENL
GIENVFVDGELTEFEYYPRQQDGVECEKRWSWVSSPSSAADAAGSAYVSALEKELVPNLL
INCCKPAFRAPIEQQDQANSENGEAKQNVKLVRINYWVEKAETGIQFNENVLHTDNQIRR
ARCWFPCVDEGSQRCCYDLEFSVAHHLVAVSTGNLLYQVLSKDDPPHKTYVYRLDVPVTA
QWISLVVAPFEILPDPHVGFISHMCLPANLAKLQNTVEFFHNAFNHYEEYLDAKFPFGSY
TQVFLAPEMVLSSCSLGASISIFSSQVLYDNRVIDQAIDTSIKLAFALAKQWFGIYIVPE
EPNDEWLLDGLAGFLTDLFIKKFLGNNEARYRRYKANCAVCKADDSGATTLSSSASCKDL
YGTNCIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQKVVLRAQDTIPVRSLSTKEFRH
FATKVGNLERPFLKEFFPRWVGSCGCPMLRMGFSYNKKKNMIELAALRECTAAPDASASV
LNPDSDNRDGDIGWPGMMSIRVYELDGMYDHPILPLAGEMWQLLEIQCHSKLAARRFQKP
KKGSKPDGSDENADVVPATDMRSSLESPLLWIRADPEMEYLAEIHFNQPVQMWINQLEKD
EDVVAQAQAIAALEALPQLPFSVVTALNSFLIDSKAFWRVRIEAAFALANTASEETDWSG
LLHLVKFYKSQRFDATIGLPKPNDFHDFPEYFVLEAIPQAVAMVRAADKKSPREAIEFVL
QLLKYNDNTGNPYSDVFWLAALVQSVGQLEFGQQSVMLLSSLLKRIDRLLQFDRLMPSDN
GILTISCIRTLVQIASKLSGSVHLDHVFELIKPFRNFKTIWQIRIESSRALLDLEFHCRG
IDAALSLFIIYLKEEPSLRGQAKLAAHAMRLCQIRDGSNSKDVIKNATLLALLGVLECHV
AFNNIYLRHYLFCILQILAGRMPTLYGVPRDKTSCLGNTETLGEPRNIFATLVLEPKTLD
PPVVISKSDQDNIAIPEAPKEADTISSNHLQKMDLVITENMKEPGMISNNHDQKMDLTVP
EPLKEADTISNNQERKMPVVKIRVKKSAASSRADEADNQTVERSQGAHREIDRGASSSVS
VDAPPRNSTEAVSANNQNVEEVNSCLDHGSRMTASIGSAKVASDGDNYGKELQCTADSSK
VFVLSRPEDPPSPSVMQDNNVDTGAQKYASLQNLSVGRLDCDGGSSGALVSPHCRKEKDK
KKDKEKKRKREDHKGHKDDPEYLERKRLKKEKKRREKEMAKLLGDEANASSMGGLVKIQE
PSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPRFRIKIKNRTLNKS
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgcgtaagccgaagaatgaggacgctaagcccgataattccggagctgta
gtccgtcatcagaagctctgcctctctatcgacatggataagcgccaaatttatggttat
acggagttggaaattgctgtcccagatataggaattgtgggtttacatgcggagaattta
ggtatcgagaatgtgtttgtggatggtgagcttacggagtttgaatactatccgcgccag
caagatggggtagaatgcgaaaagagatggagttgggtgtcttctcctagctcagctgct
gatgctgcaggctctgcttatgtttcggcgctcgagaaagaactggttcctaatttactc
attaactgttgcaagccagcctttagggctcccattgaacaacaggatcaagcgaactca
gagaatggtgaagctaagcagaatgtgaaattggttcgtatcaactattgggtagagaaa
gcagaaacagggattcaatttaatgaaaatgtgctgcatacagataaccagattaggcgt
gcaagatgttggttcccttgtgtggatgaaggttctcagcgttgctgttatgatctggag
ttctctgttgcacatcaccttgtcgccgtcagtactggcaacttactatatcaggttttg
agcaaggatgatcctcctcataaaacttatgtctacagattagatgttccagtaactgct
caatggatatcattagtggttgcaccatttgagatccttcctgatcctcatgttggtttc
atatcacacatgtgcttgccagctaatctagcaaagcttcagaatactgtggaatttttt
cacaatgcattcaaccattatgaagaataccttgatgcaaaatttccttttggatcgtat
acgcaagtgttcttagctcctgagatggtgttatcctcatgtagtttgggagcttccatt
agcatttttagttctcaagttttatatgacaacagggttattgatcaggccatagacacg
agcatcaaactagcttttgcacttgcgaaacagtggtttggaatttatatagttcctgag
gaacccaatgacgaatggcttctggatgggcttgctggttttctgacggatttgtttatc
aagaaatttttaggaaataatgaagcacgttacaggagatacaaggctaattgtgctgtt
tgcaaagcagatgatagtggtgctacaactttaagctcctctgcttcttgtaaggattta
tatggaaccaattgcattggtatatatgggaaaatacggtcttggaagtctgtggcaatt
ctgcaaatgttggaaaagcaaatggggccagaatcctttcgcaaaattttgcagaaagtt
gtcttgcgggctcaagatacaatccctgtgagatctcttagtacaaaggagtttcggcat
tttgctactaaggttggaaatcttgagcgtccgttcttgaaagaattttttcctcggtgg
gttgggtcatgcgggtgtccaatgttgaggatggggttctcatataacaaaaagaaaaat
atgattgaactggcggctctaagagagtgtacagctgctcctgatgctagtgcatcagtt
cttaaccctgattctgataatcgagatggtgatattggatggcctgggatgatgagtatc
agggtttatgaacttgacggtatgtatgaccaccctattcttcccttggctggagaaatg
tggcagcttctggaaatacagtgccattcaaagcttgctgctagacgcttccaaaagcct
aaaaagggttctaaacctgatggctctgatgaaaatgctgatgttgtacctgcaacagat
atgcgctccagtttggaatctcccttgttatggattagagctgatccagaaatggaatac
ctcgctgaaattcactttaatcagcctgtacagatgtggatcaatcagctggagaaggat
gaggatgttgtggctcaggcacaagcaattgcagcactagaagcattaccacagctgcca
ttttctgttgtaactgccctgaatagtttcctcatcgactccaaggccttctggagagtt
cggattgaggcggcttttgcattggctaatacagcatccgaggaaactgattggtctggt
ttacttcacttggtaaaattttacaaaagtcaaaggtttgatgcaacaattggactcccc
aagccaaatgactttcatgattttccagagtactttgttcttgaggccattcctcaagct
gtggcaatggttagagctgcagacaaaaagagcccgagggaagctattgaatttgttttg
caacttttaaagtataatgataatactggaaatccttattctgatgtgttctggcttgct
gcattggtccagtctgtgggtcaacttgaatttgggcaacagagtgtgatgcttttatca
tcccttctcaagcgcatcgataggcttttgcaatttgacaggctgatgcctagcgacaat
gggatcttgacaatcagctgcatccgtactttggtacagatcgcatcaaagctttctgga
tctgttcatcttgatcacgtttttgaacttataaaaccttttcgaaattttaaaacaata
tggcaaattcgaattgaatcaagcagagcactccttgatctggaatttcactgccggggc
attgatgcagcattgtctttgttcatcatatatttgaaggaggaaccaagcctaagaggg
caggcaaaacttgctgcgcatgctatgcggttatgccagatacgagatggatctaattcg
aaggatgtcatcaagaacgcaactcttctggctttgcttggtgtgcttgagtgccacgtg
gcgttcaataacatatatcttaggcactacttgttctgcatcttacaaatccttgcagga
aggatgccaacactttatggggttcccagagataaaacatcatgtcttggtaatactgaa
acattgggtgagccgaggaacatttttgcaacacttgttctggagccaaagactctagat
cctcctgtggtcatttcaaaatctgatcaggataatatcgctattccagaggctcccaag
gaagcagacaccatctccagtaatcacctacaaaagatggatttggtaattacagaaaac
atgaaggaacctggtatgatctccaataatcatgaccagaagatggatttgaccgttcct
gaacctttaaaagaagcagatacaatctctaacaatcaagagcgtaagatgccagttgtc
aagattagagtaaaaaaatctgctgcttctagtagagcagatgaggctgataatcaaact
gttgaaagatctcaaggtgcgcatcgtgaaattgatcgtggggccagcagttctgtttct
gtggatgcaccccctaggaattccactgaggcagtgagtgcaaacaatcaaaacgttgag
gaagtcaattcatgtcttgaccatgggtctcggatgactgctagcattggcagtgcgaaa
gttgcaagtgatggggacaattatgggaaggaacttcagtgcactgctgattcgagcaaa
gtttttgtgctctctcggccagaggatccaccatcacctagtgtcatgcaagataataat
gtggatactggggcacaaaaatatgctagtcttcaaaacctttcagttggaagattagat
tgtgatggtggttcatcaggagctttggtatctcctcactgcaggaaagaaaaggacaag
aaaaaagacaaggaaaagaaacggaaacgggaagatcataaagggcacaaggatgatcct
gagtacctggaaaggaagcggttgaagaaagagaaaaaacggagggaaaaggaaatggca
aagttgcttggtgatgaggcaaatgcttcttcaatgggaggacttgttaaaatacaggaa
cccagcagcattaaattggcaactgttcaagtgaagccaagcgaatccagtggttccaaa
atggcgaaccccaatgtggaaacaaaacctgagccatctgaaggtaactctgctcctaga
tttcgaattaaaattaagaataggacgctgaataaatcctaa
DBGET
integrated database retrieval system
