Jatropha curcas (Barbados nut): 119369568
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Entry
119369568 CDS
T03922
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119369568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
119369568
03400 DNA repair and recombination proteins [BR:
jcu03400
]
119369568
Enzymes [BR:
jcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119369568
Transcription machinery [BR:
jcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
119369568
DNA repair and recombination proteins [BR:
jcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
119369568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
119369568
NCBI-ProteinID:
XP_037491867
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MVREKVKVSTSTRTRQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGELE
GTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTA
QDIILPPSVEIVDNTQHVASLTEPIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMP
VRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLH
LENNQHDVTLPFFPFHDRLVKLTKKKKEIALKYIFIDQSELPPRIYNCLKKSNIHTLLDL
LNNSREDLMKIEHFRIEDVKQILGILEKK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaaaagtctctacttcgactcggacacgacagtggaagtgtgtt
gaatcaagaacagatagtaagcgcctttattatggacgctttattctgtctccacttatg
aaaggccaagccgacacaataggcattgcgatgcgaagagctttgcttggagaactagaa
ggaacatgcattacacgtgcaaaatctgagaaaataccccacgaatattctaccatagta
ggtattcaagaatcagtccatgaaattttaatgaatttgaaagaaattgtattgagaggg
aatttgtatggaactcgtaacgcctttatttgtgccaagggtcccggatatgtaactgct
caagacatcatcttaccaccttctgtggaaatcgttgataatacacagcatgtagccagc
ctaaccgaaccaattgatttgtgtattggattacaaatcgagagaaatagaggatacggt
ataaaaacgccaaagaactttcacgacggaagttatcctatagatgctgtattcatgcct
gttcgaaatgcgaatcatagtattcattgttatgggaatgataatgaaaaacaggagata
ctttttctagaaatatggacaaatggaagtttaactccgaaagaagcacttcatgaagct
tctcgcaatttgattgatttatttattccttttctacatacggaagaagaaaacttacat
ttagaaaacaatcaacacgatgttactttacctttttttccgtttcatgatagattagtt
aaactaacaaaaaagaaaaaagaaatagcattgaaatatatttttattgaccaatcagaa
ttgcctcccaggatctataattgtctcaaaaagtccaatatacatacattattggacctt
ttgaataacagtcgagaagaccttatgaaaattgaacactttcgcatagaagatgtaaaa
caaatattgggcattctagaaaagaagtag
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