Jatropha curcas (Barbados nut): 7564840 Help Entry 7564840           CDS       T03922                                  Symbol rpoB, JacuC_p012 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03020   RNA polymerase Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     7564840 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:jcu03021]     7564840 (rpoB)    03400 DNA repair and recombination proteins [BR:jcu03400]     7564840 (rpoB) Enzymes [BR:jcu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      7564840 (rpoB) Transcription machinery [BR:jcu03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      7564840 (rpoB) DNA repair and recombination proteins [BR:jcu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       7564840 (rpoB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  7564840 NCBI-ProteinID:  YP_002720104 UniProt:  C0LE66 LinkDB All DBs Position CP AA seq 1072 aa AA seqDB search MLGDGNEGLSTIPGLNQIQFEGFCGFIDQGLTEELYKFPKMEDTDQEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVSAGLIWKTSRDMQEQTIFIGNIPLMNSLGTFIINGIYR IVINQILQSPGIYYRSELDHNGIPVYTGTIISDWGGRVELEIDRKARIWARVSRKQKISI LVLSSAMGLNLREILENVCCPEIFLSFLNLNDKGKKKMGSKENAILEFYQQFTCVGGDPV FSESLCKELQKKFFQQRCELGRIGRLNMNRRLNLDIPHNNTFLLPRDILAAADHLIGMKF GMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTIWGAIRHKLIPTPQNLVTS TPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHY GRICPIDTSEGINVGLIGSLAIHAKIGYWGSLESPFYGISEGSKKARMLYLSPNREEYYR VAAGNSLALNRGVQEEQVAPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHND ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVSLDSGVPAIAEHEGKIIYTDIDKIILS GNGDTLRIPLVMYQRSNKNTCMHQKTQVQRGKCIKKGQVLADGAATVGGELALGKNVLVA YMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPEKITNEIPHLEAHLLR NLDKNGIVILGSWVETGDILVGKLRPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLP IGGRGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQD MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRK LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI HGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVSHILQEMLTYKSDHIRARQE VLGTTIIGGTIPKPEDAPESFRLLVRELRSLALELDHFLVSEKNFQINRKEV NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt atgctcggggatggaaatgagggactgtctacaatacctggattaaatcagatacaattt gaaggattttgcgggttcattgatcagggcttaacagaagaactttataagtttccaaaa atggaagatacagatcaagaaattgaatttcaattatttgtggaaacatatcaattagta gagccattgataaaagaaagagatgctgtatatgaatcacttacatattcttctgaatta tatgtatctgcgggattaatttggaaaaccagtagggatatgcaagaacaaacaattttt attggaaacattcctctaatgaattccctgggaacttttataataaatggaatatacaga attgtgatcaatcaaatattgcaaagtcccggtatctattaccggtcagaattggatcat aacggaatcccggtctataccggcaccataatatcagattgggggggaagagtagaatta gagattgatagaaaagcaaggatatgggctcgtgtgagtaggaaacagaagatatctatt ctagttttatcatcagctatgggtttgaatctaagagaaattttagagaatgtgtgctgc cctgaaattttcttatcttttctgaatctgaatgataagggaaaaaaaaaaatggggtca aaggaaaatgccattttggagttttatcaacaatttacttgtgtaggcggagatccagta ttttctgaatccttatgtaaggaattacaaaagaaattctttcaacaaagatgtgaatta ggaaggattggtcgattaaatatgaaccggagactgaatcttgatatacctcataacaat acatttttgttaccacgagatatattggcagctgcggatcatttgattggaatgaaattt ggaatgggtacacttgacgatatgaatcatttaaaaaataaacgtattcgttctgtagcg gatctcttacaagatcaattcggattggctctgattcgtttagaaaacgtggttagaggg actatatggggagcaattaggcataaattgataccgacccctcaaaatttggtaacttca actccattaacaactacttatgaatcttttttcggattacacccattatctcaagttttg gatcgaactaatccattgacacaaatagttcatgggagaaaatcgagttatttgggtcct ggaggattaacgggacgaactgctagttttcgaatacgagatatccaccctagtcactat gggcgcatttgcccaattgacacgtctgaaggaatcaatgttggacttattgggtcttta gcaattcatgccaagattggttattgggggtctttagaaagcccattttatggaatctct gagggatcaaaaaaagcacggatgctttatttatcaccaaatagagaggaatactatagg gtagcggcaggaaattctttggcgctgaatcgaggtgttcaggaagaacaggttgctcca gctcgatatcgtcaagaattcctgactattgcatgggaacaggtgcatcttcgaagtatt tttcccttccaatatttttctattggagcttccctcattccttttatcgagcataatgat gcgaatcgggctttaatgagttctaatatgcaacgtcaggcagttccactttctcgatcc gaaaaatgcattgttggaactggattggaacgccaagtttctctagattcaggggttcct gctatagccgaacacgagggaaagataatttatactgatattgacaaaatcattttatcg ggtaatggagatactctacgcattccattagttatgtatcaacgttccaacaaaaatact tgtatgcatcaaaaaacccaggttcagcggggtaaatgcattaaaaagggacaagtttta gcggatggtgccgctacagttggtggcgaactcgccttgggcaaaaacgtattagtagct tatatgccatgggagggttacaattttgaggatgcggtgctcattagcgaacgtctggta tatgaagatatttatacttcttttcacatacggaaatatgaaattcagactcatgtgaca agccaaggacctgaaaagatcactaatgaaataccgcatctagaagcccatttactccga aatttagacaaaaatggaattgtgatcctaggatcttgggtggagacgggcgatatttta gtaggtaaattaaggcctcaaatggcgaaagaatcatcgtatgctccagaagatagatta ttaagagctatacttggtattcaggtatcgacttcaaaggaaacttgtctaaaactacct ataggtggtaggggtcgagttattgatgtgagatggatccagaaaaaggggggttccagt tataatccggaaacgattcgtgtctatattttacagaaacgtgaaatcaaagtgggtgat aaagtagctggaagacatggaaataaaggcatcatttccaaaattttgcctagacaggat atgccttatttgcaagatggaagacctgttgatatggtcttcaacccattaggagtacct tcacgaatgaatgtaggacagatatttgaatgctcactcgggttagcggggggtctgcta gatagacattatcgaatagcaccctttgatgagagatatgaacaagaggcttcgagaaaa ctagtgttttcggaattatatgaagccagtaagcaaacagcaaatccgtgggtatttgaa cccgagtatccgggaaaaagtagaatatttgatggaagaacgggggatccttttgaacag cctgttataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaata catggacgttccagtggacattatgcacttgttacacaacaaccccttagaggaagggcc aagcaagggggacaacgggtcggagaaatggaggtttgggctctagagggatttggtgtt tctcatattttacaagagatgcttacttataaatctgatcatattagagctcgccaagaa gtacttggtactacgatcattgggggaacaatacctaaacctgaagatgctccagaatct tttcgattgctcgttcgagaactacgatctttggctctggaactggatcatttccttgta tctgagaagaacttccagattaataggaaggaagtttaa

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