Jatrophihabitans cynanchi: M6B22_01490
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Entry
M6B22_01490 CDS
T09893
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M6B22_01490 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcy03019
]
M6B22_01490 (rny)
Messenger RNA biogenesis [BR:
jcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M6B22_01490 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WAX57454
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All DBs
Position
complement(311338..313071)
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AA seq
577 aa
AA seq
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MNGVWYAAVGAVFILGVLFIQAYSRRSSSGGGRRGGHATGATEGAGDTLASAETEATRRR
AVAEADALRRAAETEAEAVRRAAKSELQSVHADAESIRARAAAEAEAAIADGRRQGEAVA
ARLGAELDGARADLQAQSRRLDEREAALAADGSRLSAEAAELENAARLLAERQAELASAE
SDLARRDAELRARGAEHERELARIAGLTAEQARAELLAGVEITARRDAAQLVRTIENEAR
TEGTERARAIVAEAVQRVASEQTTETVVSVLHLPADDMKGRIIGREGRNIRAFESVTGVN
VIIDDTPEAVLLSCFDPVRREIGRLTLDKLILDGRIHPHRIEEAYEQSKTEVEALCLRAA
RDALADVGVHDLDERLLPTLGRLKYRTSYGQNVLGHLMETAHIAGVMAAELGIEPTLVKR
CAFLHDIGKALTHEVEGSHALIGAELLRKYGETEAVAHAVEAHHNEVQPRTIEAVLTQAS
DTCSAARPGARRESLENYVKRLARIEQIATAKEGVEKVFAMQSGREVRVMVQPTEVDDLA
AQVIAREIAKQIEDELTYPGQIRVTVVRESRSTEIAH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggggtctggtacgcggcggtcggagcggtgttcatcctgggcgttctgttcatc
caggcctacagccgtcggagcagttcgggcggcggcaggcgcggtggccacgctaccggc
gccaccgagggcgccggcgacacgctcgcgagcgccgagaccgaggccacccggcgccgg
gccgttgccgaagccgacgcattgcgccgggccgccgagaccgaggccgaggccgtccgt
cgggccgccaagtccgagctgcagagcgtgcacgccgacgccgagtcgatccgcgcccgc
gccgcggctgaggccgaggctgcgatcgccgacggccggcgccagggtgaggcggtggcc
gcgcggctgggcgcggagctggacggggcgcgagctgacctgcaggcgcagtcccgccgg
ctggacgaacgtgaagcagcgctcgccgccgacgggtcccggctgagcgccgaagcggcc
gaactggagaatgccgcccgcctgctcgccgagcgtcaggcagaacttgccagcgcggag
agcgacctggcgcggcgcgatgccgagctgcgtgcccgcggcgccgaacacgagcgtgag
ttggcccgcatcgccggactgacggccgagcaggcgcgggccgagttgctggccggcgtc
gagatcactgcacgccgcgacgccgcccagctggtacgcaccatcgagaacgaagcccgc
accgagggcaccgaacgggcccgcgccatcgtcgccgaggcggtacagcgggtcgccagc
gagcaaacgaccgaaaccgtggtcagcgtgctgcacctgccggccgatgacatgaagggc
cgcatcatcggccgcgaggggcgcaacatccgcgccttcgagtcggtcaccggcgtcaac
gtcatcatcgacgacacgcccgaagcggtgctgctcagctgcttcgatccggtgcgccgc
gagatcggccgactcaccctggacaagctcatcctggacggccggatccacccgcatcgc
atcgaggaggcgtacgagcagagcaagaccgaggtcgaagcgctctgcctgcgggcagcc
cgggacgccctcgccgatgtcggcgtccatgacctggacgagcggctgctgccgacgctg
ggccggctgaaataccgcaccagctacggccagaacgtcctcggccacttgatggagacc
gcgcacatcgccggcgtgatggcggccgaactgggcatcgagccgaccctggtgaagcgc
tgcgcgttcctgcacgacatcggcaaggcgctcacccacgaggtcgagggcagccacgcc
ctgatcggcgccgagctgctgcgaaaatacggcgagaccgaggccgtggcgcacgccgtg
gaggcgcaccacaacgaggtgcagccgcgcaccatcgaggcggtgctcacccaggcctcg
gacacctgctcggccgcgcggcccggcgcccgccgcgagtcgctggagaactacgtcaag
cggctggcccgcatcgaacagatcgccaccgcgaaagagggggtggagaaggtcttcgcg
atgcagtccggccgggaggttcgggtgatggtgcagcccaccgaggtggacgacctggcc
gcgcaggtgatcgcccgcgagatcgccaagcagatcgaggacgaactcacctaccccggc
cagatccgggtcaccgtggtgcgcgaatcacgctcgaccgagatcgcgcactga
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