KEGG   Jatrophihabitans cynanchi: M6B22_03195
Entry
M6B22_03195       CDS       T09893                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
jcy  Jatrophihabitans cynanchi
Pathway
jcy03030  DNA replication
jcy03410  Base excision repair
jcy03420  Nucleotide excision repair
jcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M6B22_03195 (polA)
   03410 Base excision repair
    M6B22_03195 (polA)
   03420 Nucleotide excision repair
    M6B22_03195 (polA)
   03440 Homologous recombination
    M6B22_03195 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jcy03032]
    M6B22_03195 (polA)
   03400 DNA repair and recombination proteins [BR:jcy03400]
    M6B22_03195 (polA)
Enzymes [BR:jcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M6B22_03195 (polA)
DNA replication proteins [BR:jcy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     M6B22_03195 (polA)
DNA repair and recombination proteins [BR:jcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     M6B22_03195 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M6B22_03195 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 HHH_5 DNA_pol_lambd_f DUF3083
Other DBs
NCBI-ProteinID: WAX57781
LinkDB
Position
complement(657322..660024)
AA seq 900 aa
MTVASSERPTLLLLDGHSLAYRAFYALREVEMSTTTGQPTNAVFGFTSMLINLLRDENPT
HIAVAFDVSRKTFRSDAYAEYKAGRSATPDDFKGQVTLIREVLDALRICSLAVDNFEADD
VIATLTTQAVAQQMRVLICTGDRDALQLVNDDVTVLYPRRGVSDLTRFTPEAVQEKYGLT
PAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWVREFGTFDALVAGVDTVKGKVGDALRDN
LASVIRNRRLTELVRTVELEVGVDDLARQQWDRDEVHKLFDDLQFTVLRDRLFATVAAPE
PEAEQGFDVAVTRLGVDEVAQWLDEHVRSGARAGLAFRGQWGRGTGVLTGIALAATDGAA
AFLDPAALTPADESALAGWLADPAATKAVHDLKGPLLALRQHNWTIDGVTSDTQLAGYLL
RPDQRSYDLADLALRYLRRELRNNDAATESGQLTLDGGVEESDEALAQVETLRAAAVRDL
ADAFDRDLDRDGAVGLLRELELPLTYVLADMEATGIAVDTDALLALQAELAAGVKDVEQD
AHRVAGREFNLGSPKQLQEILFDQFALPKTKRIKTGYTTDADSLADLYVKTEHPILELLL
RHREVARLKTVVDGLLPLVDDQGRIHTTFNQTVAATGRLSSTDPNLQNIPVRTAEGRRIR
EAFTVGAGFESLMTADYSQIEMRIMAHLSRDAGLIEAFQSGEDLHTFVASRAFDLPADQI
DSELRRRVKAMSYGLAYGLSAFGLSKQLKITPEEARGQMDAYFTRFGGVRDYLHSVVEDA
RQTGYTATILGRRRYLDKLNSENRNLREMAERAALNAPIQGSAADIIKIAMLGVHRGLAN
AGLRSRLLLQVHDELVLEIAPGEREQVEDLVRAQMGGAYQLDVPMDVSVGIGRTWHEAAH
NT seq 2703 nt   +upstreamnt  +downstreamnt
gtgacagtcgcgagctccgaacgtcccacgctgctgctgctcgacgggcactccctggcg
taccgcgcgttctacgcgctgcgcgaggtggagatgtccacgaccaccgggcagccgacc
aacgcggtgttcgggttcacctcgatgctgatcaacctgctgcgcgacgagaacccgacg
cacatcgcagtggccttcgacgtctcgcgcaagacgttccgcagtgacgcctacgccgag
tacaaggcgggtaggtcagcgacgccggacgacttcaagggtcaggtcacgctgatccgc
gaagttctcgacgcgctgcggatctgctcgttggcggtggacaacttcgaggccgacgac
gtgatcgccacgctcaccacgcaggccgtcgcgcagcagatgcgggtgctgatctgtacc
ggcgaccgcgacgccctgcaactggtgaacgacgacgtcaccgtgctctacccgcgccgc
ggcgtcagcgatctcacccggttcacgccggaggcagtgcaggagaagtacggcctgacg
cccgcgcagtaccccgacttcgccgcgctccgtggcgacccgagcgacaacctgcccggc
atccccggggtgggcgagaagaccgcagccaagtgggtgcgcgagttcggcaccttcgac
gcgctcgtcgcgggcgtggacaccgtcaagggcaaggtcggtgacgcgctgcgggacaac
ctcgccagcgtgatccgcaaccgccggctcaccgagctcgtgcgcacggtcgagctcgag
gtgggggtcgacgacctggcgcggcagcagtgggaccgcgacgaggtgcacaagctgttc
gacgacctgcagttcaccgtgctgcgcgaccggctcttcgccacggtcgccgcgccggag
ccggaggcggagcaggggttcgacgtcgcggtcacccggctcggtgtcgacgaggtggcg
cagtggctggacgagcacgtgcgcagcggggcacgtgcggggctggccttccgcggccag
tgggggcgcggcaccggcgtcctgaccggcatcgcgctggccgcgacggacggcgcagct
gccttcctcgacccggccgcgctgacgccggccgacgagagcgcgttggccgggtggctg
gccgacccggcggccaccaaggcggtgcacgacctcaagggcccgctgctggcgcttcgg
cagcacaactggaccatcgacggcgtcacgtccgacacccagctcgccggctacctgctg
cggccggaccagcgctcgtacgacctggccgacctcgccctgcgctacctgcgccgcgaa
ctgcgcaacaacgacgctgcgaccgagtccggccagctgaccctggacggcggagtcgag
gagtcggacgaggctctcgctcaggtcgagactctgcgcgccgctgccgtccgggacctc
gcggacgcgttcgaccgcgatctggatcgcgacggcgcggtcggcctgctgcgtgaactg
gagttgccgctcacctacgtgctcgccgacatggaggcgaccgggatcgccgtcgacacc
gacgcgctgctcgcgctgcaggccgaactcgcggcaggcgtcaaggacgtggagcaggac
gcgcaccgggtcgccgggcgcgagttcaacctcggctcgcccaagcagctgcaggagatc
ctgttcgaccagttcgcgctgcccaagaccaagcggatcaagaccggctacaccactgac
gccgactcgctcgcggacctgtacgtcaagaccgagcacccgatcctggagctgttgctg
cgccaccgcgaggtcgcccggctcaagaccgtcgtcgacgggctgcttccgctggtcgac
gaccagggccgaatccacaccacgttcaaccagaccgtcgcggcgaccggccggctctcg
tccaccgacccgaacctgcagaacatcccggtgcgcaccgccgagggccggcgcatccgc
gaggcgttcaccgtcggcgccggcttcgagtcgttgatgaccgccgactacagccagatc
gagatgcggatcatggcgcacctgtcgcgagacgccgggctgatcgaggcgttccagtcc
ggcgaggacctgcacacgttcgtggcctcccgcgcgttcgacctgcctgccgaccagatc
gacagcgagctgcgccgccgggtcaaggcgatgtcgtacgggctggcgtacgggctgtcg
gcgttcgggctgtccaagcaactgaagatcacgcccgaggaggcgcgcgggcagatggac
gcgtacttcacccgcttcggcggcgtgcgcgactacctgcactcggtggtggaggacgcc
aggcagaccggctacacggcgaccatcctgggcaggcggcgctacctggacaagctgaac
agcgagaaccggaacctgcgcgagatggccgagcgggccgcgctgaacgctccgatccag
ggcagcgcagccgacatcatcaagatcgcgatgctcggcgtgcaccgcgggttggcaaat
gcggggctgcgttctcgactgctgctgcaggtgcacgacgaactggtgctcgagatcgcg
ccgggggagcgtgaacaggtcgaagacctcgtgcgcgcccagatgggcggcgcgtaccag
ctggacgtgccgatggacgtctcggtcggcatcggccgcacctggcacgaagcggcgcat
tga

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