Jatrophihabitans cynanchi: M6B22_04450
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Entry
M6B22_04450 CDS
T09893
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03030
DNA replication
jcy03430
Mismatch repair
jcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M6B22_04450
03430 Mismatch repair
M6B22_04450
03440 Homologous recombination
M6B22_04450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcy03032
]
M6B22_04450
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_04450
Enzymes [BR:
jcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M6B22_04450
DNA replication proteins [BR:
jcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M6B22_04450
DNA repair and recombination proteins [BR:
jcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M6B22_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
UVR
GIY-YIG
DEDDh_C
ThiF
Motif
Other DBs
NCBI-ProteinID:
WAX58023
LinkDB
All DBs
Position
909974..911767
Genome browser
AA seq
597 aa
AA seq
DB search
MAHPAYVQTSLDELDEPLRLTTFTVVDLETTGGSAAADAITEVGAVRVCGGEVRGEFQTL
VDPGVPITPFVSVLTGITDAMVSGSPRIGSVLPAFLEFARGSVLVAHNAPFDVGFLRAAC
IDQGLAWPGFPVVDTALLARRVLTRDEVPNCKLGTLAAFFGAGTSPNHRALADARATVDV
LHALIGRLGSLGVQSLPELRAFTAQVSPAQRRKRHLADGLPAAPGVYVFRDAQGTPLYVG
TSRNLRSRVRQYFVASETRTRMGEMVGLAERVDPIVCAHPLEAQVRELRLIAAHKPRYNR
RSKFPERSAWLKLTDEAFPRLSIVPTARGEAAAYLGPLRSQRQAEAVRDAIHDAVPLRQC
TDRLSVRRVVRAACALAGIGRCSAPCEGKVPAADYAALADLVAAAWAGDVRPLIGPLERK
LAELSAAQRYEQAAVVRDRIATVVRACARMQRLQALTGIDELVAARPADDKHARRDTGAR
PGHPGWDIVVVRRGRLAAAGVAPAGTAPWPVIEALLATADTVDPEHEALTEESECILRWL
EEPGVRLVHATHPWAVPAHGAGGLVSWLAADSAQRAASPFADRRPLPMSARPARASA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatccggcatacgtgcagaccagcttggacgagctggacgagccgctgcggctg
accacgttcacggtggtcgacctggagaccaccggcggctcggcggcggccgacgccatc
accgaggtgggcgcggtgcgggtctgcggcggcgaggtccggggcgagttccagaccctg
gtcgatcccggcgtcccgatcaccccgttcgtcagcgtgctgaccggcatcaccgacgcg
atggtgtccggctcgccgcggatcggctcggtgctgcccgcgttcctggagttcgcgcgc
ggcagcgtgctggtggcgcacaacgcgccgttcgacgtcgggttcctgcgcgccgcgtgc
atcgatcagggcctcgcctggccgggcttcccggtcgtcgacacggcactgctcgcccgc
cgggtgctgacccgcgacgaggtgcccaactgcaagctgggcaccctggcggccttcttc
ggcgccggcacctcgcccaaccaccgcgcgctggccgacgcccgggcgaccgtcgacgtg
ctgcacgcgctgatcggccgcctcggcagcctgggcgtgcagtcgctgccggagctgcgc
gcgttcaccgcgcaggtctcgccggcacagcgccgcaagcggcacctcgccgacgggctg
cccgccgcgcccggcgtctacgtgttccgcgacgcgcaggggacgccgctgtacgtgggc
accagccgcaacctgcgctcgcgggtgcggcagtacttcgtcgccagcgagacccggacc
aggatgggcgagatggtcgggctggccgagcgggtcgacccgatcgtctgcgcgcacccg
ctcgaggcgcaggtgcgcgagctgcggctgatcgccgcgcacaagccgcgctacaaccgc
cggtccaagttcccggagcgctcggcgtggctcaagctcaccgacgaggcctttccacgg
ctgtccatcgtgccgacggcgcgcggggaagcggccgcctacctcgggccgctgcgctcg
cagcggcaggccgaggcggtccgcgacgcgatccacgacgcggtgccgctgcgccagtgc
accgatcggctgagcgtgcgccgggtggtgcgcgcggcatgcgcgctcgccggcatcggc
cggtgctccgccccgtgcgagggcaaggttccggcggccgactacgccgcgctcgccgac
ctggtggcagcggcgtgggccggcgacgtgcggccgctgatcggcccgctcgagcgcaag
ctcgccgagctgtccgcggcgcagcggtacgagcaggccgcggtcgtgcgcgaccggatc
gccaccgtcgtgcgcgcctgcgcccgcatgcagcggctgcaggcgctgaccggcatcgac
gagctggtggccgcccgcccggccgacgacaagcacgcccggcgcgacaccggcgcgcgg
cccggtcacccggggtgggacatcgtggtcgtgcgccgcggccggctcgcggccgcgggg
gtggcgccggccggcaccgcgccgtggccggtcatcgaggcgctgctggccaccgcagac
accgtcgatcccgagcacgaggcgctgaccgaggagagcgagtgcatcctgcgctggctc
gaggaaccgggcgtgcggctggtgcacgccacgcacccgtgggccgtaccggcgcacggg
gccggcggcctggtgtcctggctggcggccgactcggcgcagcgggccgcgtcaccgttc
gccgaccggcggccgctgccgatgagcgctcgcccggcccgcgcgagcgcctga
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