Jatrophihabitans cynanchi: M6B22_05180
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Entry
M6B22_05180 CDS
T09893
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M6B22_05180 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcy03019
]
M6B22_05180 (orn)
03009 Ribosome biogenesis [BR:
jcy03009
]
M6B22_05180 (orn)
Messenger RNA biogenesis [BR:
jcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M6B22_05180 (orn)
Ribosome biogenesis [BR:
jcy03009
]
Eukaryotic type
Pre-60S particles
RNases
M6B22_05180 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WAX58162
UniProt:
A0ABY7K3H2
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All DBs
Position
1054321..1054938
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AA seq
205 aa
AA seq
DB search
MTNPLVWIDCEMTGLDLARDALIEVAVLVTDAELNTLDAGLDLVIHVADDVLDTMVPFVR
DMHATSGLTDAVRASTITLGEAEKRVLDYVKQHVPEARVAPLCGNSIATDRGFLNRDMPA
LDEHLHYRMIDVSSVKELAKRWYPRVYQSQPDKGLAHRALADITESIQELQYYRRTLFVP
PPGPTLDEAKAAAQAVLGTTGGQVD
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgactaacccgctggtgtggatcgactgtgaaatgaccgggctggacctcgcgcgcgac
gcactcatcgaggtcgccgtgctggtcaccgacgccgagctgaacacgctcgacgcgggg
ctggacctcgtcatccacgtcgccgacgacgtcctggacacgatggtgccgttcgtccgg
gacatgcacgccacatccgggctcaccgacgcggtccgggcctcgacgatcaccctgggc
gaggccgagaaacgggtgctggactacgtcaagcagcacgtgccggaagcgcgggtggcg
ccgctgtgcggcaactcgatcgcgaccgaccgcggcttcctcaaccgcgacatgcccgcg
ctggacgagcacctgcactaccggatgatcgacgtcagctcggtcaaggagctcgccaaa
cgctggtacccgcgcgtctaccagtcccagccggacaagggactggcccaccgggctctc
gccgacatcaccgagagcatccaggagctgcagtactaccggcgcacgctgttcgtgccg
ccgcccggcccgaccctggacgaggccaaggcggccgcgcaggcggtattaggcactacc
ggcggccaggtagactga
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