Jatrophihabitans cynanchi: M6B22_08730
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Entry
M6B22_08730 CDS
T09893
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M6B22_08730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcy03021
]
M6B22_08730
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_08730
Enzymes [BR:
jcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M6B22_08730
Transcription machinery [BR:
jcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M6B22_08730
DNA repair and recombination proteins [BR:
jcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M6B22_08730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WAX58833
UniProt:
A0ABY7K2U7
LinkDB
All DBs
Position
complement(1814698..1815726)
Genome browser
AA seq
342 aa
AA seq
DB search
MLISERPSVTEEPITDTRSKFIIGPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVEGVKEDVTDIILNLKELVVSSESDEPVVMYLRKQGPGEVTAADIAPPAGVTVHN
TDLKIATINKKGRLEIELVVERGRGYVTAVQNKQPGQEIGRVPVDSIYSPVLKVTYAVEA
TRVEQRTDFDRLVVDVETKSSITPRDAVASAGHTLVELFGLFRELNEEAEGIDVGPSPAE
VADIAAFSMPIEDLDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGSKSIDEVKIK
LHGLGLALKDSPPGFELPTSVESYGDDDFDNGDGDFAETEQL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatctccgagcgcccctcggtcaccgaggagcccatcaccgacacccggtcgaag
ttcatcatcggcccgctggagcccggcttcggctacaccctcggcaactcgctgcggcgc
acgctgctgtcctcgattcccggtgcggccgtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccaccgtcgaaggggtcaaggaggacgtcaccgacatcatcctgaacctc
aaggagctggtggtcagctccgagagcgacgagccggtggtcatgtacctgcgcaagcag
ggcccgggcgaggtcaccgccgcggacatcgcgccgccggccggggtcaccgtccacaac
accgacctgaagatcgccacgatcaacaagaagggccggctggagatcgagctggtcgtc
gagcgtgggcgcggctacgtcaccgcggtacagaacaagcagcccgggcaggagatcggc
cgcgtgccggtcgactcgatctactcgccggtgctgaaagtgacgtacgcggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgaccggctcgtggtcgacgtggagaccaagagc
tcgatcaccccgcgcgacgcggtcgccagcgccggccacaccctggtcgagctgttcggc
ctgttccgcgagctgaacgaggaggccgagggcatcgacgtcggaccgtcgccggccgag
gtggccgacatcgccgcgttctcgatgccgatcgaggacctggacctcaccgtccgctcg
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtcggacgcagtgag
gccgacctgctggacatccgcaacttcgggtccaagtccatcgacgaggtcaagatcaag
ctgcacggcctgggcctggccctgaaggacagcccgcccggattcgagctgcccacctcg
gtcgagtcgtacggcgacgacgacttcgacaacggcgacggcgacttcgccgagaccgag
cagctgtaa
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