Jatrophihabitans cynanchi: M6B22_12965
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Entry
M6B22_12965 CDS
T09893
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy02020
Two-component system
jcy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M6B22_12965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M6B22_12965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcy03021
]
M6B22_12965
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
jcy02035
]
M6B22_12965
Transcription machinery [BR:
jcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M6B22_12965
Bacterial motility proteins [BR:
jcy02035
]
Flagellar system
Flagellar assembly proteins
Stator
M6B22_12965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Tnp_1
RM44_endonuclase
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
WAX55455
UniProt:
A0ABY7JUT0
LinkDB
All DBs
Position
complement(2656463..2657350)
Genome browser
AA seq
295 aa
AA seq
DB search
MTAVTNAPESASTPTVDELVRTHLPLVGHLVRELLGRVPSHVNRDDLISAGMLALTVSAQ
GFDASRGVPFGRFAAFRIRGALTDELRTMDWASRAVRGKAREIEAVRNQLAATLGRTPSR
DEVANTMGVAAHELDAVDADVQRAAVLSIQGLTENNGAELLPDHEAGPEGILMHREQLGI
LRDAIAELPERLCTVVREYFFEQRKMADIAADLGVTESRVSQLRSEALAMLRTGMRAQDG
DAAPAPAPTSRRRDSAREAYCAAIAARSTLAGRLEASTLLGEARLVAPLRQRVAN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgtaaccaacgcgcccgagagcgcttccacgcccaccgtcgacgagctggtg
cgcacgcacctcccgctggtcggccacctggtgcgtgaactgctcggccgtgttccgtcg
cacgtcaaccgcgacgacctcatctccgccgggatgctggcgctgacggtgagcgcgcag
ggcttcgacgcctcgcgcggcgtcccgttcggccgcttcgccgccttccgcatccgcggc
gccctcaccgacgagctgcgcacgatggactgggccagccgggccgtccggggcaaggcc
cgcgagatcgaggcggtgcgcaaccagctagccgccaccttgggccgcaccccgagccgc
gacgaggtcgccaacacgatgggtgtcgcggcacacgaactcgacgcggtggacgccgac
gtccagcgggcggccgtgctgtcgatccagggcctgaccgagaacaacggtgccgagctg
ctgcccgaccacgaggccggccccgagggcatcctgatgcaccgcgagcagttgggcatc
ctgcgcgacgcgatcgccgaactccccgagcggctgtgcacggtagttcgggagtacttc
ttcgagcagcgcaagatggccgacatcgccgccgatctcggcgtgaccgagtcccgcgtc
tcacagctgcggtcggaggcgctggccatgctgcgcaccgggatgcgtgcccaggatggc
gacgccgccccggcacctgcccccaccagccgccgccgcgacagcgcccgcgaggcctac
tgcgccgccatcgccgcacgctccaccctggccggccggctcgaggccagcaccctgctc
ggcgaggcccgcttggtcgcgccgctgcgccagcgcgtggccaactga
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integrated database retrieval system
