KEGG   Jatrophihabitans cynanchi: M6B22_14295
Entry
M6B22_14295       CDS       T09893                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
jcy  Jatrophihabitans cynanchi
Pathway
jcy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    M6B22_14295
  09124 Replication and repair
   03420 Nucleotide excision repair
    M6B22_14295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcy03021]
    M6B22_14295
   03400 DNA repair and recombination proteins [BR:jcy03400]
    M6B22_14295
Enzymes [BR:jcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M6B22_14295
Transcription machinery [BR:jcy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     M6B22_14295
DNA repair and recombination proteins [BR:jcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     M6B22_14295
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: WAX55703
UniProt: A0ABY7JT12
LinkDB
Position
complement(2915202..2916851)
AA seq 549 aa
MTDGPLIVQSDKTLLLEVEHPQSAEARAAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEQVVDALVRFSRYAVPHALLVDVADTMDRYGRLQLVKHPTHGLVLVSLDRAVLEEVL
RQKKIAPMLGDRVDPDTVLVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIELRAEGW
TLRDYQQQAADMFWAGGSGVVVLPCGAGKTLVGAAAMARAKATTLILVTNTVAGRQWKRE
LLARTSLTEEEIGEYSGEKKEIRPVTIATYQVMTTRRKGEYRHLELFDSRDWGLIIYDEV
HLLPAPIFRLTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIENQGWIAP
ADCTEVRVTLTDAERMAYATAEPEDRYKLAATARTKLPVIRTIVEQHPDDQVLVIGAYLD
QLDDISAELDGAPIIQGSTTNKERERLFDAFRHGEERVLVVSKVANFSIDLPEAAVAVQI
SGTFGSRQEEAQRLGRVLRPKHDGRQAHFYTVIARDTLDAEYAAHRQRFLAEQGYAYTIV
DADDLLRPL
NT seq 1650 nt   +upstreamnt  +downstreamnt
gtgaccgacggcccgttgatcgtccagtccgacaagaccctgctgctcgaggtcgagcac
ccgcagtccgccgaggcgcgcgcggcgatcgcgccgttcgccgaactcgaacgctccccc
gaacacgtgcacacctaccggctcaccccgctggggctgtggaacgcgcgagccgcgggc
cacgacgccgagcaggtcgtcgacgcgctggtccggttcagccgctatgccgtcccgcac
gcgctgctggtcgacgtcgccgacacgatggaccgctacggccggctgcagctggtcaag
cacccgacgcacggcctcgtcctcgtctcgctggaccgcgccgtgctcgaagaggtgctg
cggcagaagaagatcgcgccgatgctgggcgatcgcgtcgacccggacacggtgcttgtg
cacccgtccgagcggggccggctcaagcaggcgctgctcaaggtcggctggccggccgag
gacctcgccgggtacgtcgacggcgaggcgcacccgatcgagctgcgcgccgaaggctgg
acgctgcgcgactaccagcagcaggcggccgacatgttctgggccggcggctccggcgtg
gtcgtgctgccctgcggcgccggcaagacgctggtcggcgcggcggcgatggcgcgcgcc
aaggcgaccacgctgatcctggtcacgaacaccgtcgcgggccgccagtggaagcgcgaa
ctgctcgcccgcacctcgctcaccgaggaggagatcggcgagtacagcggcgagaagaag
gagatccggccggtcaccatcgccacgtaccaggtgatgacgacccggcgaaagggcgag
taccggcacctggagctgttcgactcgcgcgactggggcctgatcatctacgacgaggtg
cacctgctgcccgcgccgatcttccggctcaccgccgacctgcagtcgcggcgccggctg
gggctgaccgcaacgctgatccgcgaggacggccgcgagggcgacgtcttctccctcatc
gggcccaagcgctacgacgcgccgtggaaggacatcgagaaccagggctggatcgcgccg
gccgactgcaccgaggtccgcgtcacgctgaccgacgcggagcggatggcgtacgcgacg
gccgagccggaggaccgctacaagctggccgcgaccgcacgcaccaagctgccggtgatc
aggaccatcgtcgagcagcacccggacgatcaggtgctggtcatcggcgcgtacctggac
cagctcgacgacatctccgccgagctcgacggtgcgccgatcatccagggctcgaccacg
aacaaggagcgcgaacggctgttcgacgcgtttcgccacggcgaggagcgggtgctggtc
gtgtccaaggtggccaacttctcgatcgacctgcccgaggcggccgtcgcggtgcagatc
tccggcaccttcggctcgcggcaggaggaggcacagcggctcggccgggtgctgcggccc
aagcacgacgggcggcaggcgcacttctacacggtcatcgcgcgggacaccctggacgcc
gagtacgccgcgcaccgccaacgcttcctggccgaacagggctacgcgtacacgatcgtc
gacgccgacgatctcttgagaccgctgtag

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