Jatrophihabitans cynanchi: M6B22_14295
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Entry
M6B22_14295 CDS
T09893
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M6B22_14295
09124 Replication and repair
03420 Nucleotide excision repair
M6B22_14295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcy03021
]
M6B22_14295
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_14295
Enzymes [BR:
jcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M6B22_14295
Transcription machinery [BR:
jcy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M6B22_14295
DNA repair and recombination proteins [BR:
jcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M6B22_14295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WAX55703
UniProt:
A0ABY7JT12
LinkDB
All DBs
Position
complement(2915202..2916851)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEVEHPQSAEARAAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEQVVDALVRFSRYAVPHALLVDVADTMDRYGRLQLVKHPTHGLVLVSLDRAVLEEVL
RQKKIAPMLGDRVDPDTVLVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIELRAEGW
TLRDYQQQAADMFWAGGSGVVVLPCGAGKTLVGAAAMARAKATTLILVTNTVAGRQWKRE
LLARTSLTEEEIGEYSGEKKEIRPVTIATYQVMTTRRKGEYRHLELFDSRDWGLIIYDEV
HLLPAPIFRLTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIENQGWIAP
ADCTEVRVTLTDAERMAYATAEPEDRYKLAATARTKLPVIRTIVEQHPDDQVLVIGAYLD
QLDDISAELDGAPIIQGSTTNKERERLFDAFRHGEERVLVVSKVANFSIDLPEAAVAVQI
SGTFGSRQEEAQRLGRVLRPKHDGRQAHFYTVIARDTLDAEYAAHRQRFLAEQGYAYTIV
DADDLLRPL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggcccgttgatcgtccagtccgacaagaccctgctgctcgaggtcgagcac
ccgcagtccgccgaggcgcgcgcggcgatcgcgccgttcgccgaactcgaacgctccccc
gaacacgtgcacacctaccggctcaccccgctggggctgtggaacgcgcgagccgcgggc
cacgacgccgagcaggtcgtcgacgcgctggtccggttcagccgctatgccgtcccgcac
gcgctgctggtcgacgtcgccgacacgatggaccgctacggccggctgcagctggtcaag
cacccgacgcacggcctcgtcctcgtctcgctggaccgcgccgtgctcgaagaggtgctg
cggcagaagaagatcgcgccgatgctgggcgatcgcgtcgacccggacacggtgcttgtg
cacccgtccgagcggggccggctcaagcaggcgctgctcaaggtcggctggccggccgag
gacctcgccgggtacgtcgacggcgaggcgcacccgatcgagctgcgcgccgaaggctgg
acgctgcgcgactaccagcagcaggcggccgacatgttctgggccggcggctccggcgtg
gtcgtgctgccctgcggcgccggcaagacgctggtcggcgcggcggcgatggcgcgcgcc
aaggcgaccacgctgatcctggtcacgaacaccgtcgcgggccgccagtggaagcgcgaa
ctgctcgcccgcacctcgctcaccgaggaggagatcggcgagtacagcggcgagaagaag
gagatccggccggtcaccatcgccacgtaccaggtgatgacgacccggcgaaagggcgag
taccggcacctggagctgttcgactcgcgcgactggggcctgatcatctacgacgaggtg
cacctgctgcccgcgccgatcttccggctcaccgccgacctgcagtcgcggcgccggctg
gggctgaccgcaacgctgatccgcgaggacggccgcgagggcgacgtcttctccctcatc
gggcccaagcgctacgacgcgccgtggaaggacatcgagaaccagggctggatcgcgccg
gccgactgcaccgaggtccgcgtcacgctgaccgacgcggagcggatggcgtacgcgacg
gccgagccggaggaccgctacaagctggccgcgaccgcacgcaccaagctgccggtgatc
aggaccatcgtcgagcagcacccggacgatcaggtgctggtcatcggcgcgtacctggac
cagctcgacgacatctccgccgagctcgacggtgcgccgatcatccagggctcgaccacg
aacaaggagcgcgaacggctgttcgacgcgtttcgccacggcgaggagcgggtgctggtc
gtgtccaaggtggccaacttctcgatcgacctgcccgaggcggccgtcgcggtgcagatc
tccggcaccttcggctcgcggcaggaggaggcacagcggctcggccgggtgctgcggccc
aagcacgacgggcggcaggcgcacttctacacggtcatcgcgcgggacaccctggacgcc
gagtacgccgcgcaccgccaacgcttcctggccgaacagggctacgcgtacacgatcgtc
gacgccgacgatctcttgagaccgctgtag
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