Jatrophihabitans cynanchi: M6B22_15320
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Entry
M6B22_15320 CDS
T09893
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy00521
Streptomycin biosynthesis
jcy00523
Polyketide sugar unit biosynthesis
jcy00525
Acarbose and validamycin biosynthesis
jcy00541
Biosynthesis of various nucleotide sugars
jcy01100
Metabolic pathways
jcy01110
Biosynthesis of secondary metabolites
jcy01250
Biosynthesis of nucleotide sugars
Module
jcy_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M6B22_15320 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M6B22_15320 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
M6B22_15320 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M6B22_15320 (rfbB)
00525 Acarbose and validamycin biosynthesis
M6B22_15320 (rfbB)
Enzymes [BR:
jcy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
M6B22_15320 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
DapB_N
Motif
Other DBs
NCBI-ProteinID:
WAX55898
LinkDB
All DBs
Position
complement(3134063..3135058)
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AA seq
331 aa
AA seq
DB search
MRVLVTGGAGFIGTNFVRLTLQTRPDVAVTVLDALTYAGSRDNLADVQERLEFVHGDITD
ATLVDDLVRRCDVVVHFAAESHNDNSLRDPSPFVRTNLVGTFTILEAVRRHGVRLHHIST
DEVYGDLALDDPAKFTPSTPYNPSSPYSSTKAGSDLLVRAWVRSFGVAATLSNCSNNYGP
YQHIEKFIPRQITNVLSGIRPKLYGAGENVRDWIHVDDHNTAVWAVIERGRIGETYLIGA
DGERNNRDVLRTVLELMGRPADWYDQVTDRVGHDLRYAIDASLLRSELGWEPAYTDLRAG
LTQTIAWYEQHRQWWQAAKDAVEARYAEAGQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgctcgtcaccggcggcgccgggttcatcggcaccaacttcgtccggctgacc
ttgcagacccggcccgacgtcgccgtcaccgtgctggacgcgctgacctacgccggcagc
cgggacaacctcgccgatgtgcaggagcggctcgagttcgtccacggcgacatcaccgac
gccacgctggtcgacgacctggtgcgccgctgcgacgtggtcgtgcacttcgccgccgag
tcgcacaacgacaactcgctgcgcgacccgagcccgttcgtccggacgaacctggtcggg
acgttcacgatcctggaggcggtgcgacggcacggtgtgcggctgcaccacatctccacc
gacgaggtctacggcgacctcgccctggacgacccggcgaagttcacgccgagcacgccg
tacaacccgtccagcccgtacagctccacgaaggccggctcggacctgctggtgcgcgcc
tgggtgcgctcgttcggcgtggccgcgacgctgtcgaactgctcgaacaactacgggccc
taccaacacatcgagaagttcatcccgcgccagatcaccaacgtgctcagcgggatccgg
cccaagctgtacggcgcgggcgagaacgtccgcgactggatccacgtcgatgaccacaac
acggcggtgtgggcggtgatcgagcgcggacggatcggcgagacgtacctgatcggcgcg
gacggcgagcgcaacaaccgcgacgtgcttcgcaccgtgctcgagctgatgggcaggccg
gccgactggtacgaccaggtcaccgaccgggtcgggcacgacctgcgctacgcgatcgac
gcgagcctgctgcgctccgagctcggctgggagccggcgtacaccgatctgcgcgccggg
ttgacccagacgatcgcctggtacgagcagcaccggcagtggtggcaggcggccaaggac
gcggtcgaggcccgctacgccgaagccggtcagtga
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