Jatrophihabitans cynanchi: M6B22_16745
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Entry
M6B22_16745 CDS
T09893
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03420
Nucleotide excision repair
jcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M6B22_16745
03430 Mismatch repair
M6B22_16745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_16745
Enzymes [BR:
jcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M6B22_16745
DNA repair and recombination proteins [BR:
jcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M6B22_16745
MMR (mismatch excision repair)
Other MMR factors
M6B22_16745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WAX56173
LinkDB
All DBs
Position
3432322..3435516
Genome browser
AA seq
1064 aa
AA seq
DB search
MSGISAVRLAAILDLPEPTGEQAEVIESALQPAVVIAGAGSGKTETMAARVVWLVANRKV
APDAVLGLTFTRKAAAELGKRIRRRLAQWRAVVERNEPDDEDYLALLRAGEPTVSTYAAY
AGRLVAEHALRLGAEPDARLLSPAVAWQLADRVMRRHREPLPRDIGAPSSVVDYVLAMAG
QFADHLVRPDDVEAFCVEVIARFDALPPGKGIRSERPGSTADLLRAIEHRLALLPLVRAF
AAAKAELPGVDFGDQMWLAAELAQLEEVRAIERARFGAVLLDEYQDTGHAQIAMLHGLFG
AGHPVTAVGDPYQSIYGWRGASAGNIGAFESTFTHADGSPAAVHPLATSFRNDRLILQAA
NHVAAPLRTSHVTVALRPHASAGPGRVLAARLETDGEEAGWLAAQLHAAWNELPVGARTA
AVLVRRRAQIPLLADALQRAGLPVEIVGLGGLLTTAEVADVVATLRVLAEHKPGRSLVRL
LTGARWRIGAADLAALRNRSLWLVRPPDGDERESRQRELPSLVEALDDPGPAEAYSAEGY
RRLSALSGELRRLRRRTGVPLAELVAEVERVIGIDVEVAARPDRAAIGRVHLDRFLDEAA
QFAADADETGLRAFLAYLDAAEEEENGLEAGEVVVEAERVQILTVHGAKGLEWDVVAVPG
LVEKVFPAEAKSVNWTRTRHELPGPLRGDSDGLPPFTLDGAADRREVRDRLQQHHEQLLE
RHAQEERRLAYVALTRAKSVLLVSGFCWDTTKTPRAPSPFLTELRDYAEVPEWFEPVEDA
ANPVIATVRQACWPADPLGPHVGESGPGRRPDVEAGAALVRAAGSGDGDGDGTLFPASER
AMQWQHDVDVLLAERSALQRGEVVAIELPPQLSVSQLVELERDPQALARRLRRPVPMPPA
PWARRGTAFHTWLEQRWQAQTLLDVDELPGAADDGADDSDFLALREAFERSEWAERTPAE
VEVPFEMAVDGTVVRGRMDAVFRTADGGWLVVDWKTGRRPTGAAATAAAVQLAAYRLAWA
RLAGVPEADLRRVRAAFHYVRTGETVEPAALLDAAGLRRLVTGS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcatctccgcagtccggctggccgcgatcctcgacctgcccgaacccaccggc
gagcaggccgaggtgatcgagtccgcgctgcagcctgccgtcgtcatcgccggcgcgggc
agcggcaagaccgagacgatggccgcacgagtggtgtggctggtcgcgaaccgcaaggtg
gccccggacgcggtgctcggcctgaccttcacccgcaaggccgccgcggagctgggcaag
cggatccggcgcaggctcgcgcagtggcgcgcggtggtcgagcggaacgagccggacgac
gaggactacctcgccctgctgcgcgccggcgagccgaccgtctcgacgtacgcggcgtac
gcgggccggctggtggccgagcacgcgctgcgcctcggcgccgaacctgatgcgcggctg
ctctcgccggccgtcgcctggcagctcgccgaccgggtcatgcggcggcaccgcgagccg
ttgccacgcgacatcggtgcgccgtcgtcggtcgtcgactacgtgctggcgatggccggc
cagttcgccgaccacctcgtccgccccgatgacgtcgaggcgttctgcgttgaggtgatc
gcccgtttcgacgcgctgcctcccggcaagggcatccgttccgagcgtcccggcagcacc
gccgacctgctccgggcgatcgagcaccggctcgcgctgctgccgctcgtgcgcgcgttc
gccgccgcgaaggccgagctgcccggcgtcgacttcggcgaccagatgtggctcgccgcc
gagctggcgcagctggaggaggtgcgcgcgatcgagcgcgcgcggttcggcgcggtgctg
ctggacgagtaccaggacaccggccacgcgcagatcgccatgctgcacgggctgttcggc
gcggggcatccggtcaccgccgtcggcgacccataccagtcgatctacggctggcgcggc
gcgagtgccggaaacatcggcgcgttcgagagcaccttcacccatgcggacggatcgccg
gctgccgtccacccgctggcgacctcgttccgcaacgaccggctgatcctgcaggctgcg
aatcacgtggccgcgccgctgcgcaccagccacgtcaccgtcgcgttgcgcccgcacgcg
tccgccgggcccggccgcgttctcgccgcgcggctggagaccgacggcgaggaggccggc
tggctcgccgcgcagctgcatgccgcatggaacgagctgcccgtcggagcgcgcaccgca
gccgtcctggtgcgccgccgcgcacagattccgctgctcgccgacgcgttgcagcgggcc
ggcctaccggtcgagatcgtcggtctcggtggcctgctcacgaccgccgaggtggccgac
gtcgtggccaccctgcgggtgctggccgagcacaaacccggccgctcgctggtgcggctg
ctgaccggtgcacgctggcggatcggggcggccgatctggccgcgctgcgcaaccggtcg
ctgtggctggtgcgcccgccggacggggacgagcgtgagtcccggcagcgcgagctgccc
agcctggtcgaggcgctcgatgatccgggcccggccgaggcgtactcggccgaggggtac
cggcggctgagcgcgctgtccggcgagttgcgtcggctgcggcggcgcaccggcgtgccc
ctggccgagttggtggccgaggtcgagcgggtgatcgggatcgacgtcgaggtagcggcc
cggccggaccgtgccgccatcggccgcgtgcacctggaccggttcctggacgaggcggcg
cagttcgccgcggacgccgacgagaccggcctgcgcgccttcctcgcctacctcgacgcg
gccgaggaggaggagaacgggctggaggccggcgaggtcgtcgtcgaggcagagcgggtg
cagatcctcaccgtgcacggggcgaagggcctggagtgggacgtcgtcgcggttcccggc
ctggtcgagaaggtgttcccggcggaggcgaagagcgtgaactggacccgcacccggcac
gagctccccggtccgctgcggggcgactccgacgggctgccaccgttcaccctcgacggc
gccgccgatcgccgcgaggtgcgcgaccggctgcagcagcaccacgagcagttactggag
cggcacgcccaggaggagcgccggctcgcctacgtggcgctgacccgcgcgaagtcggta
ctgctcgtgtccgggttctgctgggacaccacgaagacgccgcgcgctccgtcgccgttc
ctgaccgagctgcgtgactacgccgaggtgccggagtggttcgaacccgtggaggacgcg
gcgaaccccgtcatcgcaaccgtgcggcaggcctgctggccggccgacccgctcggcccg
cacgtgggcgagtccgggccggggcggcggccggacgtcgaggccggggcggccttggtc
cgcgcggcgggttcgggcgacggtgacggcgacggcacgctgttccccgcgagcgagcgg
gccatgcagtggcagcacgacgtggacgtgctgcttgccgagcgcagcgcgttgcagcgc
ggcgaggtggtcgcgatcgagctgccgccccagctttcggtctcccagctcgtcgagctc
gagcgtgacccgcaagccctcgcccgccggctgcgccggccggtgccgatgccgccggca
ccgtgggcgcgccgcggcactgcgttccacacctggctcgagcagcgctggcaggcgcag
acgctgctcgacgtcgacgagctgcccggcgctgccgacgacggcgccgacgacagcgac
ttcctcgcgttgcgcgaggcgttcgagcgcagcgagtgggccgagcgcaccccggccgag
gtggaggtgccgttcgagatggcggtcgacggcaccgtggtccgcggccggatggacgcc
gtgttccggacagcggacggcggctggctggtggtcgactggaagaccgggcgccggccc
accggcgccgccgcgaccgcggccgccgtccagttggccgcctaccggctcgcctgggcg
cgactggcgggcgtgcccgaagccgacctgcggcgggttcgggccgccttccactacgtg
cgcaccggcgagaccgtcgaacccgcggcgctgctcgacgccgccggcctgcgccgcctg
gtcaccggcagctga
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