Jatrophihabitans cynanchi: M6B22_18330
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Entry
M6B22_18330 CDS
T09893
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jcy
Jatrophihabitans cynanchi
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcy03032
]
M6B22_18330
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_18330
Enzymes [BR:
jcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M6B22_18330
DNA replication proteins [BR:
jcy03032
]
Prokaryotic type
DNA Topoisomerases
M6B22_18330
DNA repair and recombination proteins [BR:
jcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M6B22_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7158
Motif
Other DBs
NCBI-ProteinID:
WAX56473
LinkDB
All DBs
Position
3755910..3756965
Genome browser
AA seq
351 aa
AA seq
DB search
MRTLEQILALYEDAERCASAAGLRYVSTDEPGITRIRCGRGFRYRRPDGSALNVAERRAI
EQLAIPPAWRQVWICTATDGHLRAVGEDERGRRQYLYHDDWRSFRDELNFYRLIDFGRRL
GPVRAAVAAQLRRRTLDRDQVLAAMLRIIDLGGLRVGTQEYADENDSYGLSTLLNRHAKV
TGGRVEFCFPAKSGRDATVTIRDAAVARVVRQLAGRSSRPLFTVTGTAITADEVNERLAE
LAAARLTAKDFRTWHGTRIAFSLLRKEDGPPDRERAILAALDAASAFLGNTRAVARAHYV
HPHVLRAYAEGELAALIAARRPIRTAQLDADERALVPLLQTLLTKLRGPAG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacgctcgagcagatcctcgccctgtacgaggacgccgagcggtgcgcgagcgca
gccgggttgcgttacgtcagcaccgacgagcccgggatcacccggatccggtgcgggcgc
ggctttcgctaccgccgcccggacggcagtgcgctgaacgttgccgagcgccgtgcgatc
gagcagctggccatcccgccggcatggcgccaggtgtggatctgtaccgccaccgacggt
cacctgcgcgcggtgggggaggacgagcgcggtcgtcgccagtacctgtatcacgacgac
tggcgcagcttccgggacgagttgaacttctaccggctgatcgacttcggtcgccggctc
ggcccggtgcgtgccgccgtagccgcccagctgcgccggcgcaccctggaccgggaccag
gttctggcggccatgctgcggatcatcgacctgggcggcctgcgcgtcggcacccaggag
tacgcggacgagaacgacagctacggactcagcacgctgctcaaccggcacgcgaaggtg
accggcgggcgcgtcgagttctgctttccggccaagtcgggacgcgacgccaccgtcacg
atccgggacgctgcagtcgcccgcgtggtgcggcagctagccggcaggagctcgcgcccg
ctgttcaccgtgaccggtaccgcgatcacggcagacgaggtgaacgagcggctcgccgaa
ctcgctgccgcacggctcactgccaaggactttcgcacctggcacggcacccggatcgcg
ttttccctgctgcgtaaggaagatggtccgcccgaccgggaacgagcgatcctggctgcg
ctcgacgccgcatccgcgttcctcggcaacaccagggcggtggcccgggcgcactacgtc
cacccgcacgtgctgcgcgcctacgccgagggtgagctggccgccttgatcgcagcgcgg
cggccgatccgaaccgcgcagctcgacgcggacgagcgcgcgctcgtgccgctgctgcag
accctgctgacgaagctcagggggccggcgggctga
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