KEGG   Jatrophihabitans cynanchi: M6B22_18340
Entry
M6B22_18340       CDS       T09893                                 
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
jcy  Jatrophihabitans cynanchi
Brite
KEGG Orthology (KO) [BR:jcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcy03021]
    M6B22_18340
Transcription machinery [BR:jcy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M6B22_18340
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 HTH_3 KORA HTH_Crp_2 GerE MarR NirdL-like_HTH MarR_2 HTH_10 YdaS_toxin DUF134 Phage_antitermQ LacI
Other DBs
NCBI-ProteinID: WAX56475
UniProt: A0ABY7JXQ1
LinkDB
Position
3757594..3758484
AA seq 296 aa
MTDRATTSSARSGRLDPELRQLVRELLLQLQDLPQDDPRRVAVRDRLVELNIPLVRYLAR
RFPASKEPLDDLVQVGMIGLLKAIDRFDPERGLEFSTYAVPTILGEIKRYFRDSTWAIHV
PRGTRDLHSAIVSARAELTQELGRSLTLADLAERVHATEQEVLEALDAGQTYTSSSLDAM
SDVIGEGRDAAFGFEDGRLRQVEWRADLRPAIANLPEAQREVLMLRFVYDQSQTQIAKAM
GVSQMQVSRLLSRSMRHLRSELGTPAAAPVDAARAPVDAPRAPVARRGRSRALTHA
NT seq 891 nt   +upstreamnt  +downstreamnt
atgacagaccgtgccactaccagttccgcccgttccgggcggctggaccccgaactccgc
cagctcgtacgggaactgctcctgcagttgcaggacctgccccaggacgacccgcgccgc
gtggccgtgcgtgatcgcctggtcgagctcaacatcccgctggtgcgttacctcgcccgg
cgcttcccggcgtccaaggagccgctggacgaccttgtccaggtcggcatgatcggcctg
ctcaaggcgatcgaccggttcgatccggagcgtggcctggagttctccacctacgccgtc
cccaccatcctcggtgaaattaagcgttacttccgcgactcgacctgggcgatccacgtt
ccccgcggtacccgcgatctgcacagcgcaatcgtctccgcccgggccgaactgacgcag
gagttgggccgctcgctcaccctggccgacctcgccgagcgggtgcacgccaccgagcag
gaggtgttggaggcgcttgacgccggccagacctacaccagcagttcgctcgatgcgatg
tccgatgtcatcggtgagggacgcgacgcggcgttcggcttcgaggacggccggctgcgg
caggtcgagtggcgggcggacctgcgcccggcaatcgccaacctgcccgaggcccagcgc
gaggtcctgatgcttcgcttcgtctacgaccagtcgcagacccagatcgccaaggcgatg
ggcgtttcccagatgcaggtgtcccggctgctgtcgcgctcgatgcggcacctgcgcagt
gaactcggcacgccggccgcggcaccggtcgacgcagcgcgcgcaccggtcgacgcaccg
cgcgcaccggtcgcccggcgcgggaggagccgggcgctgacgcacgcctga

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