Jatrophihabitans cynanchi: M6B22_20355
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Entry
M6B22_20355 CDS
T09893
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy02024
Quorum sensing
jcy03060
Protein export
jcy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
M6B22_20355 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M6B22_20355 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M6B22_20355 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
jcy02044
]
M6B22_20355 (ffh)
Enzymes [BR:
jcy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
M6B22_20355 (ffh)
Secretion system [BR:
jcy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
M6B22_20355 (ffh)
Eukaryotic Sec-SRP protein
M6B22_20355 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
MeaB
cobW
AAA_22
nSTAND3
Zeta_toxin
APS_kinase
TctA
MMR_HSR1
AAA_16
ArsA_ATPase
CLP1_P
NPHP3_N
Thymidylate_kin
AAA_30
AAA_18
AAA_33
6PF2K
AAA_31
NTPase_1
TsaE
MobB
HATPase_c
NACHT
ParA
ATP_bind_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WAX56855
LinkDB
All DBs
Position
4174794..4176347
Genome browser
AA seq
517 aa
AA seq
DB search
MFDTLSDRLSSVFTNLRGKGRLSDADIDATAREIRIALLEADVALPVVRQFTTAIKERAR
GEEVSKALNPAQQVIKIVNDELVEILGGQTRRLQFAKTPPTVIMLAGLQGAGKTTLAGKL
ARWLREQGHTPVLVACDLQRPNAVTQLQVVGERAGVAVYAPEPGNTDGGQTSSGPGGDPV
KVARDSIEFARRAQHDMVIVDTAGRLGIDADMMQQAADIRDAVQPDEVLFVVDAMVGQDA
VNTAEAFGDGVGFSGVVLTKLDGDARGGAALSVRYVTGQPIMFASNGEKLEDFDVFHPDR
MASRILGMGDMLTLIEQAQQHFDEAEAEKMAAKLSGGMQNFTLEDFLDQLMAIRRMGPIG
NLLGMLPGMGQMKDAISQVDDKDLDRTAAIIRSMTPAERENPKMINGSRRLRIANGSGVR
VNDVNQLVDRFFEARKMMGQLGGMGLPGMRRASKKGKGKKGRKGKSGRGPTQPRMPAGFN
PAAFNPAGLNPGGFGGTDQLPPGMQLPDLSKLNLPKK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacacgctctccgaccggctctcgtcggtcttcaccaacctgcgcggcaaggga
cgtctgtccgacgcggacatcgacgcgacggcccgcgagatccgtatcgccctgctggaa
gccgatgtcgcgctgcccgtggtgcgccagttcaccacggcgatcaaggaacgcgcgcgg
ggcgaggaggtctccaaggcgctgaaccccgcccagcaggtgatcaagatcgtcaacgac
gagctggtcgagatcctgggcggccagacgcggcggctgcagttcgccaagacgccgccg
acggtgatcatgctcgccggcctgcagggcgccggcaagaccacgctcgcgggcaagctg
gcccgctggctgcgcgagcaggggcacaccccggtgctggtcgcctgcgacctgcagcgg
ccgaatgcggtcacccagctgcaggtggtcggcgagcgtgccggggtcgccgtctacgcg
cccgagccgggcaacaccgatggcggccaaacctccagcgggccgggtggcgacccggtc
aaggtggcgcgcgactcgatcgagttcgcccgccgcgcccagcacgacatggtgatcgtg
gacaccgcgggccggctgggcatcgacgccgacatgatgcagcaggcggccgacatccgc
gacgccgtgcagccggacgaggtgctgttcgtcgtcgacgcgatggtcggccaggacgcg
gtgaacaccgcggaggcgttcggtgacggagtcggcttcagcggcgtcgtgctgaccaag
ctcgacggcgacgcgcgcggcggcgccgcgctgtcggtccgctacgtcaccggccagccg
atcatgttcgcctccaacggcgagaagctggaggacttcgacgtcttccaccccgaccgg
atggcctcgcgcatcctcggcatgggcgacatgctcaccctgatcgagcaggcgcagcag
cacttcgacgaggccgaggccgagaagatggccgccaagctgtccggcggcatgcagaac
ttcaccctggaggacttcctcgaccagctgatggcgatccgccggatgggcccgatcggc
aacctgctcggcatgcttcccggcatggggcagatgaaggacgcgatcagccaggtcgac
gacaaggacctggaccgcaccgccgcgatcatccgctcgatgaccccggcggaacgggag
aacccgaagatgatcaacgggtcccgccggctgcggatcgcgaacggctcgggcgttcgg
gtcaacgacgtgaaccagctggtggaccgcttcttcgaggcgcgcaagatgatgggccag
ctcggcggcatgggcctgcccggcatgcgccgcgcgagcaagaagggaaagggcaagaag
gggaggaagggcaagtcggggcgtggtccgacgcagccgaggatgccggccgggttcaac
cccgccgcgttcaaccccgccggcctgaaccccgggggattcggtgggacggatcagctg
ccgcccggcatgcagctgccggacctgtccaagctcaacctgccgaagaagtag
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