Jatrophihabitans cynanchi: M6B22_21820
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Entry
M6B22_21820 CDS
T09893
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jcy
Jatrophihabitans cynanchi
Pathway
jcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M6B22_21820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcy03400
]
M6B22_21820
Enzymes [BR:
jcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M6B22_21820
DNA repair and recombination proteins [BR:
jcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M6B22_21820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
HHH_RecD2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
TraI_hel_assoc_N
AAA_16
PIF1
SLFN-g3_helicase
UvrD-helicase
Mesothelin
UvrD_C
DCD_N
RsgA_GTPase
nSTAND3
AAA_28
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WAX57128
LinkDB
All DBs
Position
4475359..4477152
Genome browser
AA seq
597 aa
AA seq
DB search
MGPTRAGRLLSAFIAAGPVYDVVGELVPAGLDARLAGRVVDALGPGAARLLRDDPWQLLV
VWGATPADADRLARALIPDVRRDDPRRGRALVGYVLARQARDGHTVSPAGLVGDALREFG
AGDGAAAVSAALESGAVLELDDDDDDDLIGLARYVEAEDGIAQGIARLAATAEAIGIDRG
RRAHGSLDDAQQAAVAAALESGVSVLTGGPGTGKSRTVATLVALAEAAGKSVALAAPTGR
AAKRLEELCSSPASTLHRLLGAQPRQSGGEVSFDGGFARNEEWPLDEDVVVVDEASMLDV
DLADALLTACRDGTHLVFVGDAAQLPSIGPGRVLGDLIDSGSVPVTELRTLYRQDEGGSI
ARLARAVREGELPPVDDPTREVVVVPARGSAEAAHRVVQLVTDSIPRALGIAADQVQVVT
PVHRGAAGTLALNSALKAKLNPGSGKGRFDVGDRVVATANHLEAEPFGYANGEVGVVDEV
ERDGTVTVEFASGPAVVKGKALADLVHGWAITVHRAQGSEFPAVVVVVPPEAGGMLSRPL
VYTAMTRAQRHLSVVHGAGPLLARAVRQIGTLPRRTRLQVMLREYLDGGGPPSADPS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggggcccacgcgcgcgggccggctgctgtcggcgttcatcgccgccggcccggtctac
gacgtggtcggcgagctcgtgcccgccgggctggacgcgcggctcgccggccgagtcgtg
gacgccctcgggccaggggctgcccggctgctgcgcgatgacccgtggcagctgctcgtc
gtctggggcgcgaccccggcggacgccgatcggctggcccgggcgctgatcccggacgtg
cgccgcgacgatccacgccgcggccgggcgctcgtcggctacgtgctcgcccgccaggcg
cgcgacgggcacaccgtctcacccgcgggcctggtcggcgacgcgttgcgcgagttcggg
gccggcgacggcgccgccgcggtgtcggccgcgctggagtccggtgcggtgctcgagctc
gacgatgatgacgacgacgacctcatcgggctggcccgatacgtcgaggcggaggacggc
atcgcgcagggcatcgcccggctcgcagcgaccgccgaggcgatcggcatcgaccgcggc
cgccgggcgcacggcagcctcgatgacgcgcagcaggccgcggtcgccgccgcgctcgag
tccggcgtcagcgtcctgaccggcggcccgggcaccggcaagagccggaccgtcgccacc
ctggtcgccctcgccgaggctgccggcaagtcggtcgcgctcgccgcgccgaccggccgg
gccgccaagcggctcgaggagctgtgctcgtcccccgcctcgacgctgcaccggctgctc
ggtgcccagccgaggcagagcggcggcgaggtcagcttcgacggcggcttcgcgcgcaac
gaggagtggccgctggacgaggacgtcgtggtggtcgacgaggcgtccatgctggacgtc
gacctggccgacgcgctgctcaccgcctgccgcgacggcacccacctggtcttcgtcggc
gatgccgcacagctgccctcgatcggtcccgggcgcgtgctcggcgacctgatcgactcc
ggcagcgtcccggtcaccgagttgcgcaccctgtaccgccaggacgagggcggctcgatc
gcgcggctggcccgggcggtgcgcgagggcgaactgccacccgtcgacgacccgacccgc
gaggtggtcgtcgtcccggcccgcggttcggccgaggccgcgcatcgggtggtgcagctg
gtcaccgactcgatcccgcgtgccctcgggatcgcggccgaccaggtgcaggtggtgacg
cccgtacaccgcggagcagccgggacgctggccctgaacagcgcgctcaaggcgaagctg
aacccgggcagcggcaaggggcgcttcgacgtcggtgatcgcgtcgtggccaccgcgaac
cacctggaggccgagccgttcggatacgccaacggcgaggtcggggtggtcgacgaggtc
gagcgcgacggcacggtgacggtcgagttcgcctcggggccggcggtcgtcaagggcaag
gcgctcgccgatctcgtgcacggctgggcgatcacggtgcaccgggcgcagggctcggag
ttcccggccgtggtcgtggtggtcccaccggaggccggcggcatgctgtcgcgcccgctg
gtctacaccgcgatgacccgcgcgcaacggcacctgtcggtggtgcacggcgccgggccg
ctgctcgcgcgcgcggtgcgccagatcgggacgctgccgcggcgcacccggctacaggtc
atgctgcgcgagtacctggacggcggcgggcccccgtcggccgatccttcctga
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