Jeotgalibaca dankookensis: BW727_100086
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Entry
BW727_100086 CDS
T04733
Symbol
rlmCD_1
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jda
Jeotgalibaca dankookensis
Brite
KEGG Orthology (KO) [BR:
jda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jda03009
]
BW727_100086 (rlmCD_1)
Enzymes [BR:
jda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BW727_100086 (rlmCD_1)
Ribosome biogenesis [BR:
jda03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BW727_100086 (rlmCD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
Met_10
PrmA
MTS
Cons_hypoth95
TRM
Methyltransf_11
RrnaAD
Ubie_methyltran
Methyltransf_12
Methyltransf_4
Methyltransf_32
DNA_methylase
UPF0020
TPMT
DOT1
N6_Mtase
Methyltransf_23
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AQS52496
UniProt:
A0A1S6ILT2
LinkDB
All DBs
Position
96336..97724
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AA seq
462 aa
AA seq
DB search
MKTNYEAAPVTKNEKLTVSFEDLTSEGMGVAKVDGYPLFVVDGLPGESAIVKVTKVGKSY
GFARMEERLTSSQDRVPAIDVLGTRVGTMPLQHLRYSAQLDFKQDLVKRDLNRIAKLPEI
KVLPTIGMSNPWGYRNKAQIPVRADKNGKLVTGFFRKGTHELVPMENFHIQDPKIDEAIV
KVRDILQEYGVKGYDEKRNTGNIRHIMIRRGYHTGEMMVVLVTRTAKLFPMSKIIPDIRE
ALPEVVSIVQNVNPKRTNVILGDENIVLYGEDVYHDTLLGHTFAISSKSFYQINPVQTER
LYQIALDAAKLTGKETVIDAFCGIGTLSISLAEKAQHVFGLEIVPDAIEMAERNAKENNI
TNITFEVGAAEELLPKWVENGRKADVILVDPPRKGLEAAFIDAAVEMSPERIVYVSCNPS
TLARDLALFDEKGYQAREVQPVDMFPQTLHVECIVLMEKVAD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaattatgaagcagcacccgtaacaaaaaatgaaaaattaaccgtctcattt
gaagacttaacgtcagaaggtatgggcgttgctaaagtcgatggctacccgctatttgtc
gttgatggtttaccaggtgagtcagcaattgtcaaagtcacaaaagtcggcaaatcatat
ggatttgctcgtatggaagaacgtctaacttcttctcaagatcgtgttccagcaattgat
gttttgggaactcgcgttggtaccatgccactacaacatttacgttacagcgctcaatta
gattttaaacaagatttagtgaaacgtgatttaaaccgcattgctaaactacctgagatt
aaggttcttcctactattgggatgagcaatccttggggatatcgtaacaaagcccaaatt
cctgttcgagcagacaaaaatggcaaattggtaacaggatttttccgcaaaggaacccat
gagttggttccaatggaaaatttccatattcaagatcctaaaatcgatgaagcaatcgtt
aaagtacgtgatattcttcaagagtatggcgttaaaggctacgatgaaaaaagaaatacg
ggaaatattcgccacatcatgattcgccgtggttatcatactggtgaaatgatggtagtc
ctagtgacgcgtactgctaagctatttccaatgagtaaaattattccagatattcgtgaa
gcactaccagaagtcgtcagtattgttcaaaacgtcaatccaaaacggacgaatgttatt
ttgggcgacgaaaatattgtcctttatggtgaagatgtttatcacgataccttattaggt
catacttttgcgattagctcaaaatctttctatcaaatcaatccagttcaaaccgagcgt
ctctaccaaattgcactggatgctgcaaaattaaccggtaaagaaacagttattgatgct
ttctgtggtattgggacgctctcaatttccttagctgaaaaagcacaacacgtttttggt
ttagaaattgttccggatgcgattgaaatggctgaacggaatgcaaaagaaaacaatatc
accaatattacctttgaagtcggcgcagcagaagaactattgccaaaatgggttgaaaat
ggtcgtaaagcggatgttattctagttgacccaccacgtaaaggattagaagcagccttt
attgatgcagcggttgaaatgagtccagaacgcatcgtttatgtaagctgcaacccatca
acactagcgcgtgacctagccctttttgatgaaaaaggttatcaagctagagaagtacaa
cctgtcgatatgttcccgcaaacattacatgttgagtgtatagtattgatggaaaaggta
gctgactaa
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