Jeotgalibaca dankookensis: BW727_100527
Help
Entry
BW727_100527 CDS
T04733
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jda
Jeotgalibaca dankookensis
Pathway
jda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW727_100527 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jda03019
]
BW727_100527 (pnp)
03016 Transfer RNA biogenesis [BR:
jda03016
]
BW727_100527 (pnp)
Enzymes [BR:
jda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BW727_100527 (pnp)
Messenger RNA biogenesis [BR:
jda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BW727_100527 (pnp)
Transfer RNA biogenesis [BR:
jda03016
]
Prokaryotic type
tRNA degradation factors
BW727_100527 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
OB_RRP5_4th
S1_RRP5
S1_2
KH-I_KHDC4-BBP
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AQS52920
UniProt:
A0A1S6IN20
LinkDB
All DBs
Position
534704..536809
Genome browser
AA seq
701 aa
AA seq
DB search
MTEKKVFQMDWAGRPLQVEIGQVAKQANGAVLVRYGDTVVLTAAVGSKKAKDTNFFPLTV
NYEEKMYAVGKIPGGFIKREGRPSENATLTARMIDRPIRPMFQEGFRNEVQITNVIMSVD
QACPPEMAAMFGSSLALSISDIPFGGPIAGVNVGRVDGELVLNPTPEQQEQSDIELTVAG
TKDAINMVESSAKFVKEEDMLAALLFGHENIKELCEFQEKITAEIGKEKMEVTLLATDLD
LATEANELFSVKMKNAILTKDKLQRNDNIDAVKSEIDDYFTKKFMESENFVEIMKDIQQI
TEDIEKEQVRLLITKDKIRPDFRKVDEIRDLDSEVGILPRVHGSGMFTRGQTQAISAATL
APLGEHQILDGLGLEESKRFIHHYNFPQYSVGSTGRAFGPGRREIGHGALGERALKQIIP
DVEDFPYMIRLVSDVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVKDGENYT
ILTDIQGMEDHLGDMDFKVAGTREGITALQMDIKIDGITEQILEEALNQGKKARVEILDH
LETVMPAPRKELSQYAPKIEMMQIKPDKIKVVIGKGGDTINGIIEETGVKIDIDQDGNVS
IASADASMIQRAKEIIDELTREVKVGEVYLGTVKRIEKFGAFVEILKGKDGLVHISEIAK
ERIKQVEDVLAIGDKIEVKVIEIDRQGRINLSRKVLLEDKE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaaaaagtatttcaaatggattgggcaggacgtcctttacaagtagaaatc
gggcaagtagctaaacaagcaaacggtgctgttttagttcgttatggcgataccgttgta
ttgactgctgcagttggatcaaaaaaagcaaaagataccaatttcttcccattaacagtt
aactatgaagagaaaatgtatgcagttggtaaaatacccggtggatttattaaaagagaa
ggtcgtccaagtgaaaatgcgacgctaacagcacgtatgatagaccgtccgattcgccca
atgtttcaagaaggatttcgtaatgaagttcaaattacaaacgttattatgtcagtagat
caagcatgtccaccagaaatggcagcaatgtttggttcctctttagctttatcaatttca
gatattccttttggaggaccgattgcaggggtaaatgtgggccgtgttgatggagaattg
gtgctaaatccaactcccgaacagcaagaacaatctgatattgaattaacggttgctggt
acaaaagatgctatcaatatggtagaaagtagtgccaaatttgttaaagaagaagatatg
cttgcagccttactctttggtcatgaaaatatcaaagaactctgtgaattccaagaaaaa
attactgcagaaattggtaaggaaaagatggaagtgaccttattagcaacagatttagac
ttggcgacagaagcaaatgaactgtttagtgttaaaatgaaaaatgctattttaacaaaa
gataaattacaacgaaatgacaatattgatgcggttaagtcagaaattgacgattacttt
acgaaaaaattcatggaatcagaaaattttgtagagattatgaaagatatccaacaaatt
acagaagatatcgaaaaagaacaagttcgccttttgataactaaagataaaatccgccct
gatttccgtaaagtagacgaaatccgtgatttagattcagaagtaggcattttaccacgg
gttcatggttctggtatgtttacgcgtggacagactcaggctatttcagctgctacccta
gcaccacttggtgagcatcaaattttagatggtttaggacttgaagagagcaaacggttt
attcaccactacaattttccacaatattcagtaggaagcaccgggcgtgcttttggacct
ggtcgacgtgaaatcgggcatggtgcgttaggcgaacgtgcacttaaacaaattattccc
gatgttgaagattttccatatatgatccgtttagtatcagatgtattagaatctaatggt
tcttcttcacaagcaagtatctgtgcgggcactttagctttgatggatgcaggtgttcca
attaaagcaccagttgctggtatcgcaatgggactagtgaaagatggcgaaaattacacc
atcctaacggatattcaaggaatggaagatcaccttggcgatatggactttaaagtagcg
ggtacaagagaaggaattactgcacttcaaatggatataaagattgatggaattacggag
caaattttagaagaagcactgaatcaaggtaaaaaagcacgtgttgaaattctcgatcac
ttggaaacagtgatgcctgcaccgcgcaaagaactttctcaatacgcaccaaaaattgaa
atgatgcaaattaaacctgacaagataaaagttgtcattggtaaaggtggcgacaccatt
aatggtattattgaagagacaggtgttaagattgatatcgatcaagatgggaatgtaagc
attgcttctgccgatgcaagtatgattcaacgtgctaaagaaatcattgatgaattaaca
cgtgaagtaaaagtaggcgaagtgtatcttggaacagtaaaacgtattgaaaaatttgga
gcctttgttgagattcttaaaggaaaagacggactcgtccatatatctgaaatcgctaag
gaaagaatcaagcaagttgaagacgtactagcaattggagataaaatagaagtgaaagtt
attgaaattgacagacaaggtcgcataaatttatcacgtaaagttttacttgaagataaa
gaataa
DBGET
integrated database retrieval system
