Jeotgalibaca dankookensis: BW727_100594
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Entry
BW727_100594 CDS
T04733
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
jda
Jeotgalibaca dankookensis
Brite
KEGG Orthology (KO) [BR:
jda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jda03019
]
BW727_100594 (cshB)
03009 Ribosome biogenesis [BR:
jda03009
]
BW727_100594 (cshB)
Enzymes [BR:
jda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW727_100594 (cshB)
Messenger RNA biogenesis [BR:
jda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW727_100594 (cshB)
Ribosome biogenesis [BR:
jda03009
]
Prokaryotic type
rRNA helicases
BW727_100594 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Helicase_RecD
PhoH
AAA_22
EIIA-man
Motif
Other DBs
NCBI-ProteinID:
AQS52987
UniProt:
A0A1S6IN69
LinkDB
All DBs
Position
605643..606962
Genome browser
AA seq
439 aa
AA seq
DB search
MKFESFNLKPFILKAIEELGFAEPTEIQEKIIPIIQKNNSVVGRSQTGSGKSHSFLIPLI
NRLDATSQDTQIVITSPSRELAEQLYQAALQLVEHAPQEIRISNFVGGTDKQRQISKLKN
QQPHIVIGTPGRILDLINEQVLKIHTATSFVVDEADMTLDMGFLHDVDQIASRLPNKLQI
LVFSATIPNKLQPFLKKYMDNPLVINLSPKEIIAPSITNYLLATKGSDKLDVLDKVLSIG
QPYFTLIFANTKQKVNEIAQDLRGRGYDLAVLHGDIPARERKRIMRRVLNLEFQFMVATD
LAARGLDIEGVSHVVNFEIPKDTEFFIHRIGRTGRKNLPGTAITLYGPDELEGVEAIEKV
GIKFQPVIVKDKEFIEIDDRRNRDRKKPVKKEETDSRIIGMVKKAKKNVKPGYKRRLNEQ
IKQQVRKNKGSDGKRRGKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgaatcatttaatctcaagccgtttattttaaaggctattgaggagttgggt
tttgccgaaccaactgaaatacaagaaaaaattatcccaatcattcaaaaaaataatagt
gtggtgggaagatcccaaacaggttcaggtaagagccatagcttccttattccacttatt
aatcgattagatgccacaagccaagatacccaaattgttattacatcaccaagtagagaa
ttagctgaacaattataccaagctgctctacagctcgtcgaacacgcgcctcaagaaatt
agaatttctaattttgttggcggaaccgacaagcaacgtcaaatttcaaaattaaaaaat
caacaaccacatatcgttattggaacacctggtcgaattttggatttgattaacgagcaa
gttctaaaaatccatactgctacatcatttgttgtggatgaagctgatatgacacttgac
atgggttttttacatgatgtggaccaaattgcgagtcgtttgccaaataaactgcaaata
ctggttttctcggcaaccattcctaacaagttacaacctttcttgaaaaaatatatggat
aatccattagttattaatttatcaccaaaagaaattattgccccatccattactaattac
ttgttagcaacaaaagggagcgataaactggatgtactcgataaagttttatcaatcggg
caaccttatttcacgcttatttttgcaaataccaagcaaaaagtaaatgaaattgctcaa
gaccttcgcggacgaggttatgatttagccgtactccatggagatatccctgctcgagag
cgtaaaagaattatgcgccgcgttcttaatctagaatttcagtttatggttgctaccgat
ttagcagctcggggattagatattgaaggtgtctcacacgttgttaattttgaaattcct
aaagataccgaatttttcattcaccgaattggtcgaaccggtcgtaaaaacttgcccgga
actgcgattactttatatggtcctgatgaattagaaggcgttgaagcaatcgaaaaggta
ggtattaaatttcaaccggttattgttaaagacaaagaatttattgaaatcgacgacaga
agaaatcgcgatcgaaagaaaccagtgaaaaaggaagaaacggattcacgtattatagga
atggtcaagaaggccaaaaagaatgttaagccagggtataaacgccgtttgaatgagcaa
attaagcaacaagttcgtaaaaataaaggttcagatggaaaacgtagaggaaaaaaataa
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