Jeotgalibaca dankookensis: BW727_100706
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Entry
BW727_100706 CDS
T04733
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jda
Jeotgalibaca dankookensis
Brite
KEGG Orthology (KO) [BR:
jda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jda03032
]
BW727_100706 (topA)
03400 DNA repair and recombination proteins [BR:
jda03400
]
BW727_100706 (topA)
Enzymes [BR:
jda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BW727_100706 (topA)
DNA replication proteins [BR:
jda03032
]
Prokaryotic type
DNA Topoisomerases
BW727_100706 (topA)
DNA repair and recombination proteins [BR:
jda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BW727_100706 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
HypA
Motif
Other DBs
NCBI-ProteinID:
AQS53099
UniProt:
A0A1S6INH1
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All DBs
Position
731133..733199
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AA seq
688 aa
AA seq
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MAYKYLVIVESPTKAKTIEKYLGRNYKVVASKGHLRDLPKSRMAIDFENDYAPDYISIRG
KGPIIKELKKYAKKAEKVFLASDPDREGEAIAWHLAHLLGLEPNDNIRVVYNEVTKDAVK
QAVKNPRPVNMDLVSAQQARRILDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIIDRE
EEIKHFEPVESWTLDGTFQKDKHVFNAAFYGLNEKKRLKLNNESEAQEVLAKLKGNEFMV
SNVEKKEQKRNPSAPFTTSSLQQDAANKLNFRTRKTMMVAQQLYEGIPLGKAGTVGLITY
MRTDSTRIAESAVAETHQFVIDEYGKEFVAKKSKTVKQAGGSQDAHEAIRPSSVLRKPTD
IESYLTKDQFKLYQLIWSRFVASQMMPAIFDTMRVSIVNQDLVFRANGSKEKFAGYRKVY
EDTKTKDNILPDLEVGDTVFSKDIIPNQHFTQPPARYSEATLIKSLEENGVGRPSTYSPT
IETIQKRYYVKLNAKRFEPTELGTIIHQLVDAYFPNIVDISFTANMEKKLDEIELGKLEW
VEVIDEFYKPFEEHVVKAESEMEKIEIKDEPAGFDCEVCGSPMVIKIGKYGKFYACSNFP
ECRNTKAIVKKIGVTCPTCKKGEVIERKSKKNRIFYGCDRYPECEFVSWDKPVARNCPKC
NHYLVQKKVRGGLQVKCSNCDYEEEVQK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtataaatatttggtgattgttgaatcacctaccaaagcaaaaacaattgaaaaa
tatctcggacgtaattacaaagtagtagcaagtaaaggacatctgcgtgacttaccaaaa
agtagaatggcaatcgactttgaaaacgactatgcacctgattatatttctatcagaggt
aaaggtccaatcataaaagagcttaaaaaatatgcaaaaaaagctgaaaaagtcttttta
gcttctgacccggatagagaaggagaagcaattgcttggcacttagcacacctattagga
ttagaaccaaacgataatattcgtgtcgtttacaatgaagtaactaaagatgccgtcaag
caagcagttaaaaatccacgacctgttaatatggatttagtgtcggcccaacaggcacga
cggatccttgatcgaatcgtaggttactctatttcccctatactatggaagaaagtgaaa
aagggattaagtgctgggcgagttcaatcggtggctttgaagctgattattgaccgtgaa
gaagaaattaaacattttgagccagtagaatcgtggaccttagatggtacttttcaaaag
gataaacatgtttttaacgctgctttctatggcctaaatgagaaaaaaagattgaaacta
aataatgaatctgaagctcaagaagtattagctaaattaaaaggcaatgagtttatggtt
tcaaatgttgaaaagaaagaacaaaaaagaaacccatctgcaccttttacaacttcaagt
ttacaacaagatgcagcgaacaaattaaattttagaactcgtaaaaccatgatggttgca
caacaattatacgaaggtattccactaggtaaagctggtacagtcggattaattacttat
atgcgtacggactccacacgtattgcggaaagtgcagtagccgaaacgcaccaatttgtt
attgatgaatacggtaaagagtttgttgctaaaaaatcgaagacagttaaacaagcaggt
ggatcacaagatgcccacgaggcgattcgcccatcaagtgtcttgcgaaaaccaactgat
attgaaagttatttaactaaagatcaatttaaactttatcaacttatctggtctcgtttt
gtagcaagccaaatgatgcccgccatttttgatactatgcgtgttagtattgttaatcaa
gatttagtgtttcgtgctaatggatcaaaagaaaaatttgccggttatcgaaaagtttat
gaagatacgaaaacaaaggacaacatattaccagatttagaagttggtgatacggtcttt
tctaaagacatcattccaaaccaacatttcacgcaaccacctgcccgttattctgaggca
actttaattaaatcgttagaagagaatggtgttggtcgtccttcaacttattccccgaca
attgagacgattcaaaaacgttattatgttaagttaaacgcaaaacgctttgaacccaca
gaattaggaacgattatacaccaattagtggatgcttatttccctaatattgttgatatt
tcttttactgctaatatggaaaaaaagctggatgaaattgagttaggtaagttagaatgg
gtagaagtgattgatgaattttataaaccatttgaagagcatgttgttaaagcagagtct
gaaatggaaaaaatcgaaataaaagatgaaccagctgggtttgattgtgaagtctgtgga
agtccaatggttattaaaataggtaaatatggtaaattttatgcatgtagtaatttccca
gaatgccgcaatacaaaagcaattgttaaaaaaattggagtaacgtgtccaacatgtaaa
aaaggtgaagtcattgagcgaaaatcgaagaaaaaccgaattttttacggttgtgatcgc
tacccagagtgtgaatttgtatcatgggacaaaccagttgcccgtaactgcccgaaatgt
aatcactatttagttcagaaaaaggtacgtggcggactgcaagtaaaatgtagtaattgc
gattacgaagaagaagttcaaaaataa
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