Jonesia denitrificans: Jden_0006
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Entry
Jden_0006 CDS
T00972
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
jde
Jonesia denitrificans
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jde03032
]
Jden_0006
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_0006
Enzymes [BR:
jde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Jden_0006
DNA replication proteins [BR:
jde03032
]
Prokaryotic type
DNA Topoisomerases
Jden_0006
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Jden_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ACV07685
UniProt:
C7R4R2
LinkDB
All DBs
Position
7495..10110
Genome browser
AA seq
871 aa
AA seq
DB search
MTEDQNMAQGNAADVSGVVHGNIEQVDLQTEMQRSYLDYAMSVIVGRALPEVRDGLKPVH
RRVIYAMYDGGYRPDRAYSKCSRVVGDVMGKYHPHGDTAIYDTLVRLVQDWTLRYPLAAG
QGNFGSPGNDPAAAPRYTETRMAQIAMEMVRDIDKNTVDFQDNYDGRTQEPAVLPARFPN
LLVNGSAGIAVGMATNIPPHNLREVAEGVAWYLANPDASREELREALIARIKGPDFPTGA
TILGRSGIDDAYRTGRGSITMRAVVNVEEIQGRQCLVVTELPYQVNPDNLALKIADLTKE
GRIQGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFSANMLALVDGVP
RTLSIDAFIHHWVNHQLDVISRRTAFLLKEAEDKIHILRGYLRALDNLDEVIALIRRSPT
VEEARGGLIELLGIDDIQATAILNLQLRRLAALERQKIIDEHDDLERQILDYRDILASPQ
RQRDIVGSELSEIVDRYGDERRSTILPYGGEVSMEDLIAEEDVVVTITRGGYVKRTRSDN
YRAQKRGGKGVRGTQLREDDIVDHFFVTTTHHWLLFFTNLGRVYRAKAYELPEGSRESKG
QHVANLLAFQPGESIAQVLALRNYEDHEYLVLATRSGLVKKTRLSEYDTNRSAGLIAIKL
REYDDGSVDELVKAMPVNADNDLILISRLGQSIRFTADDASLRPMGRGTSGVIGMKFADG
DELLSADVVKDDADLFVVTDGGFAKRTAISEYRVQGRGGQGVKVAKLVEDRGHLVGALIT
EQDDEVLVIMEKGKIVRSAVAEVNRTGRNTQGVTFAKPDKKDRIIAVARNVERSLNDEDD
TAEDGDENDVPLPDAAVHDTPSDATAEENNA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagatcagaacatggcccagggtaacgctgctgatgtgagcggcgtggtccac
ggcaacattgagcaggttgacctgcaaaccgaaatgcaacggtcgtacctcgactatgcc
atgtcggtgatcgtgggccgtgctttgcctgaggttcgtgacgggttaaagcctgtgcac
cgccgtgtcatttacgcgatgtatgacggcggttaccgacctgatcgcgcgtattcgaag
tgttcacgtgttgttggtgacgtgatggggaagtatcacccgcacggtgacacagcgatt
tatgacacgcttgttcgtttggtgcaggactggacgctgcgttacccgctcgctgccggt
caggggaacttcgggtcaccggggaatgaccctgccgctgcaccgcgttacaccgaaacg
cgtatggcgcagatcgccatggaaatggtgcgcgatattgacaagaacactgttgatttt
caggacaactacgatgggcgcactcaggaaccagcggtgttgcccgctcgtttcccgaac
ctgttggtcaacggttctgcgggtattgctgtgggaatggccacgaatatcccgcctcat
aatttgcgtgaggtggctgagggtgttgcctggtatttggcgaaccccgatgccagccgt
gaagagttgcgtgaggcgctgatcgcccggattaagggcccagactttcccactggggcg
accattttgggtcgttccgggattgacgatgcgtaccgtactggccgcgggtccatcacg
atgcgtgcagtggtcaatgtggaagaaattcagggacgccaatgtttggttgtcaccgag
ttgccgtatcaggtgaaccctgacaatctcgcactcaagatcgctgacctcaccaaagaa
ggtcgtattcagggaatcgctgatatccgcgacgaaacctctggtcgtaccggtcagcgc
cttgtcattgtgttgaaacgtgacgcggtggcgaaggttgtgttgaataacttgtataag
cacacccagctgcaggagaacttctccgcgaacatgcttgcactggttgacggtgtgcca
cggacgttgtcgattgacgcgttcattcaccattgggtgaaccaccaacttgatgtgatt
tctcggcgtacggcgttcttgctcaaagaagctgaggacaagatccacattttgcgtggt
tatttgcgtgcgttggataatctcgatgaggtcattgcgttgattcgccgctcccccact
gtggaggaggcccgtggcgggttgattgaattgctgggtattgatgatattcaagcaaca
gcgattttgaacctgcagttgcgtcggcttgctgcgttggagcggcaaaaaatcatcgat
gaacacgacgatcttgaacgtcagatcctggattaccgcgatattttggcaagtccacag
cgccagcgtgacattgtgggaagtgaactcagtgagattgtggaccgttacggtgatgag
cgccgctccacaatccttccttatggcggtgaggtgtccatggaggacctcattgctgaa
gaagatgtggttgtcaccattacccgcggtggttacgtgaagcgtacccgttctgacaac
taccgggcgcaaaagcgtggtggtaagggtgtgcgtggaacacagcttcgtgaagatgac
attgtggatcatttctttgtcaccaccactcaccactggttgttgttcttcacgaacctt
ggtcgggtgtatcgggcgaaggcgtatgaactaccagaaggatcacgtgagtccaagggg
cagcatgtggcgaaccttcttgcgttccagccaggtgaaagcatcgcccaggtccttgcg
cttcgcaattacgaagaccacgagtaccttgtgttggcaacccgttccggactagtcaag
aagacccgtttatctgagtatgacaccaaccggtcagccggactcatcgctattaagctc
cgcgaatacgatgatggaagcgttgatgaactggtcaaggccatgcccgtgaatgcggac
aatgacctgattttgatttcccgtttgggtcagtccatccggttcacagctgacgatgcg
tcgcttcgcccgatggggaggggtacctctggcgtcatcggaatgaaattcgccgacggg
gacgaactcctctcggcagacgttgtcaaagatgatgctgatctctttgtggtcactgac
ggtgggtttgcaaaacgaactgcgatcagcgaataccgagtgcagggtcgaggcggccaa
ggtgtcaaggttgccaagctcgtggaagaccgcggtcaccttgtcggagcactcatcaca
gagcaagatgatgaagttcttgtgatcatggagaagggaaagattgtgcgttctgccgtt
gcggaggttaaccgtaccggaaggaacacacaaggtgttacctttgccaagccagacaaa
aaagatcgcattattgctgtcgcccgaaacgttgaacgatccctgaacgatgaggacgac
accgctgaagacggtgacgagaacgatgttccgttaccggacgcagcagtccacgacaca
ccatcagacgctacagctgaagagaacaacgcatga
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