Jonesia denitrificans: Jden_0087
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Entry
Jden_0087 CDS
T00972
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jde
Jonesia denitrificans
Pathway
jde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Jden_0087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_0087
Enzymes [BR:
jde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Jden_0087
DNA repair and recombination proteins [BR:
jde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Jden_0087
Prokaryotic type
Jden_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACV07763
UniProt:
C7R585
LinkDB
All DBs
Position
96784..97476
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AA seq
230 aa
AA seq
DB search
MAKTLTELAEDHLIAADWAQALEPVAPTIAALGERLRSEVSAGRGYLPAGDHVLRAFQRP
LNDVRVLIVGQDPYPTPGHPIGLSFAVDKRVRPIPRSLANMYRELHDDLGFPPAEHGDLS
SWADQGVMLLNRVLTVQPGKPASHRGWGWEAVTEHAITTLVARNRPLVAVLWGRDAANLK
PLLGSTPTVVSPHPSPLSAHRGFFGSRPFSQVNALLQEMGAEPVNWQVAP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaccctcactgaactggccgaagatcacctcattgccgcagactgggcacaa
gcgttggaaccggtcgcccccacgatcgctgcactgggtgaacggttgcgtagtgaagtc
agcgccgggcgtgggtatctaccggccggggaccatgtgttacgggcgtttcaacgccca
ctcaacgatgtgcgggtcctcattgtggggcaagacccctaccccacgccggggcacccc
attgggttgtcgttcgccgttgacaaacgggtgcggcccattccacgcagtttggcgaac
atgtaccgagaattgcacgacgacctggggttcccgcccgcagagcacggcgatctatcc
tcctgggcggatcagggagtcatgctgctcaaccgcgtcttgaccgtgcaaccagggaaa
cccgcctcccaccgcgggtgggggtgggaggcagtcacagaacatgccatcacaacgttg
gtcgcccgcaaccgtcccctcgtcgccgtgctctggggtcgagatgctgcgaacctgaaa
cccctgcttggctccacccccaccgtcgtgtcaccgcacccttcaccgttgtccgctcac
cgtgggttcttcgggtcgcggccattttctcaggtgaatgcactgttacaggagatgggg
gcagaaccagtgaactggcaggtggcgccataa
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