Jonesia denitrificans: Jden_0490
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Entry
Jden_0490 CDS
T00972
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
jde
Jonesia denitrificans
Pathway
jde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Jden_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_0490
Enzymes [BR:
jde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Jden_0490
DNA repair and recombination proteins [BR:
jde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Jden_0490
Prokaryotic type
Jden_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
HHH_3
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACV08154
UniProt:
C7R095
LinkDB
All DBs
Position
complement(530168..531103)
Genome browser
AA seq
311 aa
AA seq
DB search
MPPAPHTTPPHVDEVHAQLSAWFDGAERDLPWRRPGTTPWGVLVSEVMSQQTPVARVAPR
WERWMTMWPTPAHMAAASRDVVLTEWGTLGYPRRALRLHECARVITERHHGEVPATEEEL
RALPGIGSYTAAAIVAFAFHRRAVVLDTNVRRVIARVFAGVALPPPSPRRHEWELADALA
PLADQDAARWAVASMEFGSLVCTARTPRCDQCPIAHLCGWREAGYPDDEHAPIRRPQRFA
GTNRQVRGIIMAHLRAHRCASRDEVAGLWVADPEQLSACVESLVADGLVEETAGVFHLPD
VVVATGGVGAR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcaccacacaccacaccaccgcatgttgacgaagttcacgcccagttgtct
gcgtggttcgacggcgctgaacgcgatctgccgtggcggcgcccaggcacaacaccgtgg
ggggttttggtcagtgaggtgatgtcccaacaaacccccgtggcacgtgttgctcccagg
tgggagcgatggatgacgatgtggcccacgcccgcccacatggctgctgcatctcgtgat
gtggtcctcaccgagtggggaacgttgggttacccgcgtcgtgcactgcgcttgcacgaa
tgtgctcgtgtcatcaccgaacgtcaccacggtgaagttcccgctacggaggaagagctg
cgtgcactgccagggattggttcctacacggcggccgctattgtggcgtttgcctttcac
cggcgtgcagtggttcttgacaccaacgtgcgtcgggtgattgcgcgagtgtttgcaggg
gttgctcttccgccgccgtcgccccggcgccatgagtgggagctagccgatgcgctcgcc
ccgctagcagaccaggacgccgcacggtgggcggttgcgtccatggagtttggttcgttg
gtgtgcacagctcggacacctcggtgtgaccaatgcccgatcgcgcacctgtgcgggtgg
cgggaggcaggctatcccgatgacgagcacgcgcccattcgtcgtccgcaacgctttgcc
ggcacgaaccggcaggtgcgtggcatcatcatggctcacctgcgagcgcatcggtgtgcg
agtcgtgatgaggttgctggtttgtgggttgcggaccccgagcagttgtccgcgtgtgtg
gagtcgttggtggcggatggtttggtggaagaaacggcaggtgtcttccatcttcctgat
gtggtggtggctacgggtggggtgggtgctcgttga
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