Jonesia denitrificans: Jden_0615
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Entry
Jden_0615 CDS
T00972
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jde
Jonesia denitrificans
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jde03016
]
Jden_0615
Enzymes [BR:
jde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Jden_0615
Transfer RNA biogenesis [BR:
jde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Jden_0615
Prokaryotic type
Jden_0615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
U_exon
Motif
Other DBs
NCBI-ProteinID:
ACV08279
UniProt:
C7R164
LinkDB
All DBs
Position
655043..655975
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AA seq
310 aa
AA seq
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MLVWGTDREVGAPHLFVRDCVVGVIRIRCDVAYRGTDFVGWARQPGLRSVQGTLEDALER
LMGERIAVTVAGRTDAGVHARGQVVHCDVPGDRWERLPGRSDRTPGEALRAKLGGILPSD
VVVRRVAPAPPGFDARFSALSRTYYYRIADDVMMRDPLTAPFVLWVRSPLDVEAMNRGAA
PLVGLRDFAAFCKPRPGASTIRELQDFRWERVEQGPDEGLVRATVRADAFCHNMVRALVG
ASLDVGRGVRGEEWLVQALTSKSRVNSSAVVQPHGLTLEQVAYPPVDQLADRAQAIRARR
MDEELLDGGV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgtgtggggcaccgaccgtgaggttggtgccccacacctgtttgtgagggattgt
gtggttggcgtgattcggattcgttgtgatgtggcttatcgtggcacggactttgtgggg
tgggcacgtcagccgggtttgcgcagtgttcagggcacccttgaggacgcgttggagcgt
ttgatgggggagcgcattgcggtgactgttgctgggcgtacggatgctggtgtccatgcg
cgtgggcaggttgttcattgtgatgttcctggtgaccggtgggagcggttaccgggccgg
tcggatcgtacgccgggtgaggctctgcgagctaagttgggtgggattttgccttccgat
gtggtggttcgtcgggttgccccggcaccgcctggttttgatgcgcgtttttcggcgttg
tcgcggacctactattaccgtattgctgacgatgtgatgatgcgtgatccgttgacggcg
ccttttgtgttgtgggtacgctcacctcttgatgttgaggcgatgaatcgtggtgcagcg
ccgttggtggggttgcgggattttgcggcgttttgtaagccgcgtccaggcgcatcgact
atccgtgaactgcaggatttccgctgggagcgggtggagcaggggccagatgaagggctt
gtgcgtgccactgtgcgcgcggatgcgttttgtcacaatatggtgcgcgcgttggtgggt
gcgtctcttgatgtggggcggggggtgcgtggtgaagagtggttggtccaggcgttaacg
tcgaagtcgagggtgaattcatcggcggtggtgcagccacatgggttgactctcgagcag
gtagcgtatccgccggtcgaccaactagctgaccgggcgcaggcgatccgtgcccgccgg
atggatgaggaactgttggacggcggtgtgtga
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