Jonesia denitrificans: Jden_0670
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Entry
Jden_0670 CDS
T00972
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jde
Jonesia denitrificans
Pathway
jde03420
Nucleotide excision repair
jde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Jden_0670
03430 Mismatch repair
Jden_0670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_0670
Enzymes [BR:
jde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Jden_0670
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jden_0670
MMR (mismatch excision repair)
Other MMR factors
Jden_0670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
HNH_3
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ACV08334
UniProt:
C7R1B9
LinkDB
All DBs
Position
711733..714234
Genome browser
AA seq
833 aa
AA seq
DB search
MDSLFGHLPSVTGPTSQAALPRLAPGGAWTQPTPDEPRSAFVDDAQALLTGLNPQQQAAV
EHAGSPLLIVAGAGSGKTRVLTHRIAWLLATGRAWPSEILAITFTNKAAAEMRERVIQIV
GPSAQRMWVSTFHSTCVRILRAHASALGLKSTFSIYDSADSQRLLGLVVRELELDPKRFT
PKGVAQRISGLKDELMTPADHLVRAGSNDYEVMIGRIFERYQQRLATAHALDFDDIIVRT
VDLLRQFPEVRDHYQRRFRHILVDEYQDTNHAQYALIRELVGTDHDGLTASELTVVGDSD
QSIYAFRGASIRNILEFEQDYPQARTILLEQNYRSTQTILSAANAVISRNNDRRPKKLWT
AAGDGPAIVGYVGDTEHDEARWIAREIDSLMDKHGVRPGDVAVFYRTNNQSRALEEVLIR
VGLPYKVVGGTRFYERKEIKDVLAYLHAVNNSDDDVNVRRIINVPKRGLGDRSEAVIAQF
AAAHDISFADALRRIDTIPGLTARSTKPARAFAQLLDTWQQNVDQGVGPAGLISAILDDT
GYLELLRDSEDPQDQSRVENLAELHAVAMEYEKEDPEGGLGGFLERVSLVADADSVPSSD
DAGHEDTPVVDPGVITLMTLHTAKGLEFPVAFLTGLEDGTFPHMRALLDDSELSEERRLA
YVGVTRARERLYLTRATTRSAWGSAQQFPPSRFLDDIPAELIEWRRQYSTTEVLMNSGSR
SGSSGYSGDRSRALRDDDDFGAPIGSGRSQGLPAWKKSAAAPPPARVGAPQAKDEADIPV
LRQGDRVQHETFGVGRVVMVAGQGRNATATVHFETEGEKRLLLRYAPVTRIDQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgtttgggcacttgccttcagtgaccggtccgacctcacaagcagcgctc
cctcggttagcgccaggtggtgcgtggacacaacccacccctgacgagcctcgatcagca
ttcgtcgacgacgcacaagcgttacttacagggctgaacccgcaacagcaagcggctgtg
gagcatgcagggtccccccttttgattgtggctggggcaggatcgggcaaaacacgagtg
ttgacccaccggattgcgtggctcttggcgaccgggcgtgcgtggcccagtgaaatactg
gctattacattcacgaacaaagccgctgcggaaatgcgtgagcgcgtgatccagattgtt
ggtccatcagctcaacgaatgtgggtgtcgactttccactccacatgtgtacggattttg
cgtgcccatgcaagcgcactgggcctcaaatcgactttttcgatttatgactccgctgat
tcgcagcgcttgttgggtttagttgtccgagagttagaacttgaccccaaacgcttcacc
ccgaaaggggtagctcaacggatttcagggctcaaagatgagctcatgacgccagcggac
cacctggttcgtgctggttccaatgattacgaggtcatgattggtcggatttttgagcgc
tatcagcagcgactcgcgaccgcccatgccttggactttgatgacatcattgtgcgcacc
gttgatctgttgcggcagttccccgaagtgcgtgaccactatcaacgcaggttccggcac
atccttgttgatgagtaccaggacacaaaccatgcgcaatatgcgctgattcgggagttg
gtgggcaccgatcatgatggtctcaccgcgagtgagctgactgttgttggtgactctgac
cagtcgatttacgcattccgtggcgcgtcaatccgtaacattttggagtttgagcaggat
taccctcaagcgcgcaccattttgttggagcaaaactaccgttccacccagactatattg
tcggcagccaacgcagtcatttcgcggaacaatgaccgtcgcccaaagaagctgtggact
gctgccggtgacggcccagcaatcgttggctacgtgggagatacggaacacgacgaagca
cgatggatcgcacgagaaattgattccctcatggacaaacacggtgtgcgccctggagac
gtcgccgtgttttaccggacaaataaccaatctcgagcgctcgaggaagtgctcatccga
gtaggtttaccgtacaaagttgtgggtggcacccgcttctatgagcgcaaagaaatcaag
gacgttcttgcctaccttcatgcggtgaataacagtgacgacgacgtcaacgtgcgacgc
atcatcaatgtgcccaaacgagggttgggcgaccgcagtgaggcagtgatcgcccagttt
gctgccgcccacgacatatcatttgctgatgcgcttcgccgtattgacacgatccctggg
ctgacagcacggtcaacaaaacccgcgcgagcgtttgctcagttgctcgacacgtggcag
caaaacgtggatcaaggggtcggcccggcagggcttatttcggcgattcttgatgacacg
gggtacttggagttactccgtgatagtgaggacccacaggatcagtcccgagtagaaaac
cttgcagaacttcatgcagtggccatggaatacgaaaaagaggaccccgagggaggcctt
ggaggattccttgaacgggtgtcattggtcgcagacgcagattctgtaccgtcaagtgac
gacgcaggtcatgaagacactccggttgttgaccctggagtgatcacactgatgaccttg
catacagccaaaggactggagtttccggtggcatttctcaccggtttagaagacgggacc
ttcccccatatgcgtgcactccttgatgacagcgaactgtcagaggagcggcgtcttgcc
tacgttggcgtgactcgtgcgcgcgaacgtctctaccttactcgtgcaacaacgcggtca
gcatgggggagtgcccaacagttcccgccaagccgtttcttggatgatattcctgctgag
ctcattgagtggcggcgccagtattccacaaccgaggtcctcatgaattctggatcacgg
tcgggatcctccggttatagcggtgaccgttcccgcgcattgcgtgacgacgatgacttt
ggtgcaccgattggttccgggcgcagtcagggcttgccggcgtggaagaagtcagctgcg
gcgccgcccccagcacgggttggtgcaccccaagcgaaagatgaggcagatatcccggtc
ttgcgtcaaggcgaccgtgtgcagcatgagacctttggggttgggcgagttgtgatggtt
gctgggcaggggcgcaatgccaccgcgacggtccacttcgaaactgagggtgagaaacgg
ctcctgcttcgctacgctcccgtgacacgcatcgaccaatag
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