Jonesia denitrificans: Jden_1021
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Entry
Jden_1021 CDS
T00972
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jde
Jonesia denitrificans
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jde03016
]
Jden_1021
Enzymes [BR:
jde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Jden_1021
Transfer RNA biogenesis [BR:
jde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Jden_1021
Prokaryotic type
Jden_1021
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACV08677
UniProt:
C7R3E1
LinkDB
All DBs
Position
1083932..1084933
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AA seq
333 aa
AA seq
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MNDPREQLQFGHKGSRGKDAQPRQPRRPTAADGIIVVDKPTGMTSHDVVAIMRRLAGTRK
VGHAGTLDPMATGLLVVGVGRGTRLLHFLTAADKSYTATVRLGVATVSEDADGDVTDTQP
CDHVTREQLQAAAARLTGVIDQVPSAVSAVKIDGRRAYDRVRAGEDVVLPARSVTVSRFD
IVDVVDGPPHHGVATKDVLLSVDVSSGTYVRALGRDLAQIVGTVGHLVALRRTRVAEWTL
AEARSVPQLQDTDPTVPLDVMDLGSAAERALRVWRVSEAQAGRLAHGQRLTTELSGQYAA
VSEAGELVAVVQCGQGVARPVTVFVSGVQGASS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatcctcgggagcaactgcagttcggtcacaagggatctcgtggtaaggacgct
cagccacggcaacctcggcgtcccacggctgctgacggcatcattgtggttgataagcca
acaggtatgacgagccacgacgtcgtcgcgataatgcgtcggctggcggggacacgcaag
gttgggcatgcgggaacccttgatccgatggcgaccggacttttggtcgtgggtgtgggg
cggggaacgcgcctacttcactttctgacggccgcggataagtcctatacggcaactgtg
cgtcttggggtggccactgtgagcgaggatgctgacggtgatgtcacggacacgcaaccg
tgtgatcatgtgactcgagaacaattgcaggctgctgctgctcgactgactggagttatc
gaccaggttcctagcgctgtcagtgctgtgaagattgatgggcgtcgtgcctacgaccgt
gtccgtgcgggggaggacgtggtgttgcctgcccgttcggtgacggtgagtcggtttgac
attgtcgatgtcgttgacggtccgccacatcacggtgtggcgacaaaggatgttcttctg
tcagtcgatgtgtcaagtggaacctatgtgcgggcgcttggccgggatttggctcaaatt
gtgggaactgttggacatttggtggcgttgcggcggacccgtgtcgctgagtggactctg
gctgaggcccgtagtgtgccgcaattgcaggacaccgatccgactgtgccgctggatgtc
atggatttgggctctgcggctgaacgcgcgcttcgtgtgtggcgggtcagtgaggctcag
gcggggcgtcttgcgcatggtcagcgtctgactactgagttgtctgggcagtatgcggcg
gtgagtgaggctggcgagttggttgcggtggtgcagtgcggtcaaggggtggcacggccg
gtgacggtgtttgtgtcgggtgtacaaggagcgtcctcgtga
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