Jonesia denitrificans: Jden_1025
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Entry
Jden_1025 CDS
T00972
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jde
Jonesia denitrificans
Pathway
jde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Jden_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jde03019
]
Jden_1025
03016 Transfer RNA biogenesis [BR:
jde03016
]
Jden_1025
Enzymes [BR:
jde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Jden_1025
Messenger RNA biogenesis [BR:
jde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Jden_1025
Transfer RNA biogenesis [BR:
jde03016
]
Prokaryotic type
tRNA degradation factors
Jden_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
aRib
Sipho_Gp157
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ACV08681
UniProt:
C7R3E5
LinkDB
All DBs
Position
1088539..1090746
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AA seq
735 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGTRTVRFETGRLARQAAGSACAYLDGDTMLLSTTAVGKHPKD
QFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPSFVKGLRNEVQ
VVITVLSIHPDEAYDVLAINAASMSTQLSGLPYSGPVGGVRVALIDDQWVAFPKHSDKER
AVFDMVVSGRIVGDDVAIMMVEAEATENSWNLVKNQGATAPTEGVVAEGLEAAKPFIRAL
CEAQIELAAKSAKPQMEFPLFLDYQDDVYEAVKNAATDDLRTALTIADKQERENRQDEIK
DATLASLAEQFEGRDKEISAAIRSLTKSLVRQRVLTDGVRIDGRGLADIRTLSAEVEVVP
RVHGSALFERGETQIMGITTLNMLKMEQQIDSLGPETRKRYMHNYNFPPYSTGETGRVGS
PKRREIGHGALAERALVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGV
PLRAPVAGIAMGLISDTVDGETRYAALTDILGAEDAYGDMDFKVAGTRDFVTAIQLDTKL
DGIPASVLAGALTQARDARYTILDVIEEAIDQPDDMSPHAPRVIAVQVPVDKIGEVIGPK
GKMINQIQEDTGADITIEDDGTVYIGAADGTSAEAARAAINAIANPHVPEVGERFVGTVV
KTTTFGAFVSLTPGKDGLLHISQIRRLVGGRRVENVDDVVSVGQKLQVEIAEIDPRGKLS
LHAVVDDEAAEQGDN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcccagaaattcagttcgccgaagccgtcatcgacaatggtcgttttggtaca
cgcaccgtccgctttgaaactggtcgtcttgcacgccaggcagcaggaagcgcgtgcgca
tacctcgacggtgacaccatgcttctttcaacgactgccgtggggaaacaccccaaagat
cagtttgatttcttccccctcaccgtcgatgttgaagagcgcatgtacgccgcggggcgg
atccccggctcgttcttccgccgtgaaggacgcccctccactgaagcgatccttgcgtgc
cgtctgattgaccgcccgctgcgtccaagctttgtcaaggggcttcgtaacgaggtgcag
gttgtcatcactgtcttgtcgatccaccctgatgaggcatatgacgttcttgctatcaac
gcagcatcgatgtcgactcaactatctggtctgccctactcaggtccagttggtggagta
cgtgttgcgctcattgatgaccaatgggttgcgttcccgaagcactcggacaaagaacgt
gccgtgtttgacatggttgtttctggtcgcattgttggagacgacgttgcgatcatgatg
gtggaagctgaagccaccgaaaactcgtggaaccttgtgaagaaccaaggtgcgacagcc
ccgactgagggtgtcgtggcagaaggacttgaagcagcgaaaccattcatccgcgctttg
tgtgaggcacaaatcgagctggctgcgaagtctgcgaagcctcaaatggagttcccgctc
ttcttggactaccaggacgacgtctacgaagctgttaagaacgctgcgacagatgacttg
cgcactgcgttaacgatcgccgacaagcaggaacgcgaaaatcgacaagacgagatcaag
gacgcaactctagcctcgttggctgagcagttcgagggacgtgacaaagagatcagcgca
gcgatccgctcgttgaccaagtcccttgtacgccagcgcgtcttgactgacggtgtgcgt
atcgatggccgtggacttgcggacatccgtacgctcagcgctgaggttgaggttgtcccg
cgcgttcacggttcggcgctctttgagcgcggcgaaacccaaatcatggggatcaccacc
ctcaacatgctgaagatggaacagcagattgattctcttggcccagagacgcgtaaacgc
tatatgcacaactacaacttcccgccgtactcaacgggggaaactggacgcgttggaagc
ccgaagcgccgggaaatcggccacggtgcgcttgctgaacgcgcgcttgtccctgtgctc
ccaagccgtgaagacttcccttacgctattcgtcaggtctctgaagctctagggtcgaac
ggttccacatccatgggatctgtctgtgcatcgacattgtcgctgctcaacgccggtgtt
ccattgcgggcgcctgttgctggtattgcaatgggactgatctcagacacagtcgatggt
gaaacccgctacgctgccctgacggacattctgggcgctgaagacgcatacggcgacatg
gacttcaaggttgcggggacccgcgattttgtcaccgcgatccagcttgacaccaagctt
gacggtatccctgcttcggttcttgccggtgcattgactcaagcacgtgatgcccgctac
acgatccttgatgtcatcgaagaagctattgatcagccagatgacatgagtcctcatgca
ccacgtgtgatcgcagtgcaagttcctgttgacaagatcggtgaggttattggccccaag
ggcaagatgatcaaccagatccaagaggacacgggcgctgacatcactattgaagacgac
ggaactgtctacattggtgctgcagatggcacatctgctgaagcggcacgcgctgcaatt
aacgcgattgccaacccgcatgttcctgaggtcggagaacgctttgtgggcacggtcgtg
aagaccacaacctttggtgcgttcgtgtcactgaccccaggtaaagatgggttgctgcac
atcagccaaatccgtcgcctggtgggtggacgccgcgtggagaatgttgacgacgttgta
tctgtcgggcaaaagcttcaggttgaaattgctgagattgacccccgaggcaagttgtca
cttcacgcagtggttgacgatgaagcagcagaacagggcgacaactga
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