Jonesia denitrificans: Jden_1049
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Entry
Jden_1049 CDS
T00972
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
jde
Jonesia denitrificans
Pathway
jde00300
Lysine biosynthesis
jde00470
D-Amino acid metabolism
jde01100
Metabolic pathways
jde01110
Biosynthesis of secondary metabolites
jde01120
Microbial metabolism in diverse environments
jde01230
Biosynthesis of amino acids
Module
jde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Jden_1049
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Jden_1049
Enzymes [BR:
jde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Jden_1049
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
RGP
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ACV08705
UniProt:
C7R3G9
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All DBs
Position
1116907..1117821
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AA seq
304 aa
AA seq
DB search
MTTLPFTKGHGTRNDFVILDDPQGAIDLTEELVRALTDRRSGVGADGVIRVMRAQLSEEV
RDLVTRDPRVEWFMDYRNADGSIASMCGNGVRVFARFLEERKGVTALGAAYPIATRAGIR
TIRKIGDWYEVGMGPAQFLDDTAARTTGHDATVTIPMQPHEPARPGISVSMGNPHTVVAL
PDHDTLAELDLTRSPGVDPVPVHGTNVEFVVPDGVDTAADGTVVGRASMRVYERGVGETQ
SCGTGACAAAAALHRWAGESSPRTWTITVPGGRVQVTLGTHEVLLAGPAELVADGHITIT
SLNV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgactttgcccttcactaaaggccatggcacccgcaacgattttgtgatccttgat
gatccacagggcgctattgatctgaccgaggagctcgtgcgggctcttactgatcgccgt
tccggtgtgggcgcagatggggtcatccgggtgatgcgtgcccagttgagcgaggaagtc
cgtgatctggtgacaagagatccgcgcgtcgagtggtttatggattaccgcaatgctgat
gggtctattgcgtcgatgtgcggaaacggtgtccgagttttcgcccgcttcctcgaagaa
cgtaaaggtgtgacggccctgggcgcggcataccccattgctacccgggctggcattcgc
acgatacgaaagatcggtgactggtatgaagttggaatggggccagcccagtttctcgat
gacactgcagcccgcacaaccggtcatgacgcaacagtaacgatcccgatgcaacctcac
gagccggcgcgtccagggatttccgtatcaatgggcaacccgcacacggttgttgccctc
cccgatcatgacactctcgctgaactagatctcacccgctcaccgggagtagacccggtg
cctgtgcacggaacaaacgttgagtttgttgttcctgacggcgtggacacagcagcggat
ggaacagttgttgggcgagcttctatgcgtgtgtatgaacgaggtgttggtgaaactcaa
tcatgtgggactggcgcgtgtgcagcagctgcagcgctccaccgatgggccggagagtct
tcgccacggacatggacaatcactgtccccggaggaagggtccaggtgactttagggact
cacgaggtgttgctcgcaggccccgctgagcttgttgctgacggccacatcacgatcact
tcattgaatgtttag
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