Jonesia denitrificans: Jden_1070
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Entry
Jden_1070 CDS
T00972
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
jde
Jonesia denitrificans
Pathway
jde00300
Lysine biosynthesis
jde00550
Peptidoglycan biosynthesis
jde01100
Metabolic pathways
jde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Jden_1070
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Jden_1070
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Jden_1070
Enzymes [BR:
jde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Jden_1070
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2656
Big_1
Motif
Other DBs
NCBI-ProteinID:
ACV08726
UniProt:
C7R3J0
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All DBs
Position
1140651..1142180
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AA seq
509 aa
AA seq
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MIVVMLVELLRAGVISITSAPRCGCSRTEVTNPNEPMAVRTYSNVFTAQEIASITGGELS
CPSDVTVTGQVTIDSRTVSTGDLFVAVVGERSDGHDYACVAHSQGAVLVLSQKNIKGVPC
VVVADTQRALGDLARAHLARLREKGHIRVIGVTGSAGKTTTKDLMGQMLATYGNVVVPAG
SLNNELGLPLTVLKADETTDFLVTEMGASAVGDLHYLTSIAPLDIAVVLIVGLAHLGGFG
SAELVAQAKSELVTGLLPQGIAVLNADDHRVIAMKELAHGQVRTFGSVRGADMRAINART
DAAGRAHFDVETTAGDTASVTLTLVGEHHVTNALAALTAVTALGMPLDQAAVALSAARAT
SPHRMDVVDRPDGVTIIDDSYNANPDSMRAALRALATVAGRQRRTVAVLGEMRELGPQSR
TYHDDIGRLVVRLNISRLIVVGQGAQGIADGALQEGSWGDEVVEVADLNAAHAALNDYLQ
PNDVVLIKASHGSGLWQLADELTGKAANS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtcatgctcgtcgagctcttacgcgctggagtaatcagcatcactagtgcg
cctcggtgcggctgcagccgcaccgaagtcacgaatcccaatgagcctatggcagtaagg
acgtatagcaacgtgttcacagcgcaggagatcgcttccatcaccggcggtgagttatct
tgtccgtcagatgtcacagtgacaggacaggtcacgatcgattcgcgaacagtgtcgact
ggggacttatttgttgccgtggtcggggaacgctctgacggccacgactatgcttgcgtg
gcccactcgcaaggtgcagtgctcgtgctctcccagaaaaacatcaagggggttccctgt
gtggttgtcgctgacacccaacgcgccctcggtgatctggcacgagcacaccttgccaga
ctgcgggagaaggggcatatccgcgtcatcggagtaaccggatctgcgggaaaaaccaca
acaaaagatcttatggggcagatgctcgcaacttatgggaacgttgtggttcccgctggg
tcactcaacaatgaactgggcttgccactgacagtactgaaagcggacgaaacaacggat
ttcctcgtcacagaaatgggcgcatcggcagttggggatcttcactacctcacatctatc
gcccccctcgatattgcagtggtgttgatcgttggcctcgcacaccttggtggcttcgga
tctgcggaactggtcgcacaagcgaaaagcgaacttgtcacaggtctcctcccgcaagga
atcgcagttctcaacgcagatgaccaccgagtcatcgcgatgaaggagcttgcacacggc
caagtacgcaccttcgggtcggtccgtggagcagatatgcgagccatcaatgcccgcaca
gacgccgcagggcgcgcccactttgacgtcgaaacaacagcaggggacacagcgtcggtg
actttgactcttgtgggcgaacatcatgtcaccaacgcgctcgcggcactgacagcagtg
accgcactgggaatgccacttgaccaagctgctgttgctctgagtgctgcacgagcaacc
agtccgcaccgtatggatgttgtggaccgtccagatggtgtcaccattattgacgactcc
tacaacgccaacccagattccatgcgtgccgctctgcgagctttggccactgttgctggc
cgtcaacgccggactgtggcagtgctcggggaaatgcgtgagcttggcccccaatcacgt
acctaccacgatgacatcgggcgcctagtcgtgcggctcaatatctcgcggcttattgtc
gtaggacagggagcgcagggaattgctgacggcgccctgcaagaagggtcgtggggagac
gaggtcgtggaagtcgctgacctcaatgcagcgcatgctgccctcaacgactaccttcag
cctaacgatgtggtgttaatcaaagcgtctcacggttctggcctgtggcaactcgccgat
gaactgactggaaaggcagcaaactcgtga
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