Jonesia denitrificans: Jden_1109
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Entry
Jden_1109 CDS
T00972
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
jde
Jonesia denitrificans
Pathway
jde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Jden_1109
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jde01007
]
Jden_1109
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jde03016
]
Jden_1109
Enzymes [BR:
jde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Jden_1109
Amino acid related enzymes [BR:
jde01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Jden_1109
Transfer RNA biogenesis [BR:
jde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Jden_1109
Prokaryotic type
Jden_1109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ACV08765
UniProt:
C7R3Q8
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All DBs
Position
1179064..1181628
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AA seq
854 aa
AA seq
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MPRISLPWLADHVEVPQGLTASQLAADLVRVGLEEEAIHSSGVTGPVVVGRVVSLEAEPQ
KNGKTINWCQVDVGEHGVPGADGSFAPRGIVCGAHNFGVGDFVVVALPGAVLPGPFAISS
RKTYGHISDGMICSQRELGLGDDHAGIIVLTTLGFDERDLCVGDDALAVLGLDDEILEIN
VTPDRGYCFSMRGIAREYAHATRKVFEDRVVAGRTPPATADGFSVVVRDDAPIHGVVGCD
RFVTRLVRGIDPAAATPRWMVRRLEQAGMRSISLTVDVTNYVMLDMGQPLHAYDLSTVVE
PIVVRRAISGELLTTLDDQERVLHAEDLVIADSSGGEGARVLGLAGVMGGAATEVSARTT
DVLIEAAHFDAVSVARSARRHKLPSEASRRFERGVDPLVAPFAAQRVVELLVEFGGGVAD
PRVGDVNEVPARSSIKFSLRDPERLCGVPYSDDSVVRALQEIGCVVTAVPDSSIVDVVPP
SWRPDLTGAAELVEEVARLVGYDMIVPRLPQAPAGRGLTAAQKARRRVAAALAEWGCVET
LSYPFTSDEARDALMIDAQDVRRQSVRLRNPLQGDRSLMRTSLLETLVDTARRNVSRGIA
SFAISEIGMVTRPGDCAMSAPALPPARQPSADELEQLLASVPSQPRHVAGVLCGSRSEAS
WWGGAEAWQWSDALDAALLVAERVGVSLRVESEQNYAPFHPGRCARLVTEDLVTVGYAGE
LHPKVCEQVGLPARSCAFEVDLDALIFACDNVPVQADPVSTFPVAKEDFAFVVAEDITAA
SVRQAILDGGGADVESVQLFDVFRGEQVGAGRKSLAFAVRLRAHDRTLDAQGVSEIRERI
IKAAAFSVDAELRG
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatttcgttgccgtggttggctgaccacgtggaggttccccaaggactgact
gcgtcgcagttggctgcagaccttgtgcgggtgggtttggaagaagaagcaattcactcc
tcaggtgtcacaggaccagtggttgtgggtcgggttgtctccttagaagccgagccgcag
aaaaatggaaagaccattaactggtgtcaggtggatgtgggggagcacggtgttcctgga
gcggatggttcctttgctccacgtggcattgtgtgtggtgcgcacaactttggggtcggt
gacttcgtggttgttgcgcttccaggtgcagtgctgccgggtcccttcgctatttcgtcc
cgcaagacgtacgggcacatctccgatggaatgatttgttcccaacgcgagttgggcttg
ggcgatgatcacgcaggcatcattgttcttactactctcggttttgacgagcgagacctc
tgtgttggtgacgatgcgctcgctgtgctcgggctggatgatgagatccttgagatcaac
gtgactcctgaccgtggttactgcttttcgatgcgtgggattgctcgcgagtatgctcat
gcaactcgtaaggtttttgaggatcgagttgttgcggggcgcacaccgccagcgacggct
gatggcttttctgttgtggtacgtgacgatgcgcccattcatggggtggtcgggtgtgat
cgttttgtgacgcgtttggtgcgggggatcgacccggcagcagcgactccgcggtggatg
gttcgccgtttggagcaggcggggatgcgttctatttcgttgacagtggatgtcacgaac
tatgtcatgttggacatggggcagccgttgcatgcttatgatctctccactgtggtggag
ccgattgttgttcgtcgtgcaatctcaggcgagttattgacgacattggatgatcaggaa
cgggttcttcacgccgaagatcttgtcattgctgattcctcgggtggtgaaggtgcacga
gttcttggtcttgctggggtcatgggtggtgcggccactgaagtctcggctcgcaccaca
gatgtcctcattgaggccgcacattttgatgcggtgtcagtggcacggtcagcgcgtcgg
cataaacttccttcagaggcatcacggcgttttgagcgcggtgttgatcctctcgtggct
ccttttgccgctcagcgtgttgtggagttacttgtcgagtttgggggtggcgttgctgac
ccgcgggtcggggacgtcaatgaagtgccagcacgtagctcgattaagttctctttgcgt
gatccagagcgtttgtgtggcgtgccgtacagcgatgacagtgttgtgcgtgcgttgcag
gaaattggctgtgtggtcaccgctgttccggattcgtcgatcgttgatgttgtgccaccg
tcgtggcggcctgacttaactggtgctgcggaacttgtcgaagaggttgctcggttggtg
ggctacgacatgatcgttcctcggttaccgcaggctccggctggacgtggtttgactgct
gctcagaaggcgcgccgccgggtggcggccgctcttgctgagtgggggtgcgtggagacg
ttgtcgtatccgtttacttctgatgaagctcgtgatgcattgatgatcgatgcgcaggat
gtgcgccgtcagtcggtgcgcttgcgtaacccgttgcagggggatcgttcgttgatgcgg
acgtctttgctggagactttggtggacactgctcgtcggaatgtgtctcggggtattgcg
tcctttgcgatcagcgagatcggtatggtgacacgcccaggggattgtgcaatgagcgca
ccagcattgccaccggcccgtcagccgtcagcagatgagttggagcagttgttggcgagt
gtgccttcccagccacggcatgttgctggtgtgctgtgtgggtcacgtagtgaggcgagt
tggtggggtggcgctgaggcgtggcagtggtctgatgctcttgatgctgcgttgcttgtt
gctgagcgtgttggcgtgtcattgcgggtggagtcagaacagaactatgctccctttcac
cctgggcgctgtgcgcgtctagttactgaggatttagtgactgtgggctatgctggcgag
cttcaccccaaggtgtgtgaacaggtggggttgccggcccgttcgtgtgcgtttgaggtt
gatcttgatgcgttgatcttcgcgtgtgacaacgttccagtgcaggctgatcctgtgtcg
accttcccagtggcgaaggaagattttgcgtttgtggtagctgaagacatcacagccgct
tctgtgcgtcaagctatcctcgacggcggcggtgcggatgtggagtctgtgcagttgttt
gatgtgttccgtggcgagcaggtgggggcgggccgtaagtcgcttgcgtttgctgttcgg
ttgcgtgcgcacgaccgtactcttgatgcgcagggtgtgtctgagatccgtgagcggatt
attaaggccgcggctttcagtgttgacgctgagttgcgcggctag
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