Jonesia denitrificans: Jden_1368
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Entry
Jden_1368 CDS
T00972
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
jde
Jonesia denitrificans
Pathway
jde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Jden_1368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_1368
Enzymes [BR:
jde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Jden_1368
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Jden_1368
RecFOR pathway proteins
Jden_1368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
nSTAND3
Mg_chelatase
AAA_14
TsaE
AAA_18
AAA_3
RNA_helicase
Rad17
NTPase_1
AAA_33
Zeta_toxin
NACHT
Sigma54_activ_2
IstB_IS21
AAA_28
NB-ARC
AAA_17
ABC_tran
AAA_19
NPHP3_N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACV09024
UniProt:
C7R4G7
LinkDB
All DBs
Position
complement(1466263..1467321)
Genome browser
AA seq
352 aa
AA seq
DB search
MPDTDHPRDDIDLDSQRLVSNGADDLERAAEAALRPRTLTEFVGQPIVREQLKLVLDAAK
GRGASPDHVLLSGPPGLGKTTLAMIIAAELGVSLRVTSGPAIQHAGDLAAVLSSLDEGEV
LFIDEIHRLARPAEELLYVAMEDFRVDVVVGKGAGASAIPLSLPRFTAVGATTRAGLLPA
PLRDRFGFTGHLDFYDATDLERVVHRSAHLLGVELSPQAAQEIATRSRGTPRIANRLLRR
VRDWAQVKGTGVLDLSAAQAALTVYEVDALGLDRLDRAVLTALCTRFGGGPVGLSTLAVT
VGEEPETVETVAEPFLVREGLMGRTPRGRIATPATWQHLGLTPPQDNTTLFP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacaccgaccacccccgcgacgacatcgacctcgacagccaacgactcgtatcc
aacggagccgacgacctcgaacgagcagccgaagcagcactgcgcccacgcaccctcacc
gaattcgttggccaacccatcgtacgagaacaactcaaactcgtcctcgacgccgcaaaa
ggccgaggcgcatcccccgaccacgtcctgctctccggccccccaggactcggaaaaaca
acactcgccatgatcatcgccgcagaactaggagtctcactccgagtcacatcaggccca
gcaatccaacacgccggcgacctcgcagcagtcctatcctcactcgatgaaggtgaagtc
ctcttcatcgacgaaatccaccgactcgcacgaccagccgaagaactcctctacgtcgcc
atggaagacttccgcgtcgacgtcgtcgtcggaaaaggcgcaggcgcctcagcaatccca
ctctccctgccacgattcacagccgtcggtgccacaacccgagccggactcctgcccgca
ccactacgagacagattcggattcaccggtcacctcgacttctacgacgccaccgacctc
gaacgagtagtccaccgatcagcacacctcctcggagtcgaactctcaccacaagccgcc
caagaaatcgccacgcgctcgcggggtacgccacgcatcgccaacaggctgctgcggcgg
gtgcgtgactgggcgcaagtcaaaggaacgggtgtccttgacttgtcagcggcccaagcc
gcactgacagtttatgaagttgatgcgcttggtcttgaccgtctcgaccgggctgtcctc
accgcattgtgtactcgattcggtggaggcccggtgggtttgtccacactcgctgtgacg
gtgggagaggaaccagagacagtggaaacagtggctgaaccattcctggtgcgtgaagga
ctgatggggcggaccccgcgcggacgcatcgccacaccagccacctggcagcacctgggg
ctcactcctccgcaggacaacacaactcttttcccctag
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