KEGG   Jonesia denitrificans: Jden_1368
Entry
Jden_1368         CDS       T00972                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
jde  Jonesia denitrificans
Pathway
jde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Jden_1368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jde03400]
    Jden_1368
Enzymes [BR:jde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Jden_1368
DNA repair and recombination proteins [BR:jde03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Jden_1368
    RecFOR pathway proteins
     Jden_1368
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 nSTAND3 Mg_chelatase AAA_14 TsaE AAA_18 AAA_3 RNA_helicase Rad17 NTPase_1 AAA_33 Zeta_toxin NACHT Sigma54_activ_2 IstB_IS21 AAA_28 NB-ARC AAA_17 ABC_tran AAA_19 NPHP3_N AAA_25
Other DBs
NCBI-ProteinID: ACV09024
UniProt: C7R4G7
LinkDB
Position
complement(1466263..1467321)
AA seq 352 aa
MPDTDHPRDDIDLDSQRLVSNGADDLERAAEAALRPRTLTEFVGQPIVREQLKLVLDAAK
GRGASPDHVLLSGPPGLGKTTLAMIIAAELGVSLRVTSGPAIQHAGDLAAVLSSLDEGEV
LFIDEIHRLARPAEELLYVAMEDFRVDVVVGKGAGASAIPLSLPRFTAVGATTRAGLLPA
PLRDRFGFTGHLDFYDATDLERVVHRSAHLLGVELSPQAAQEIATRSRGTPRIANRLLRR
VRDWAQVKGTGVLDLSAAQAALTVYEVDALGLDRLDRAVLTALCTRFGGGPVGLSTLAVT
VGEEPETVETVAEPFLVREGLMGRTPRGRIATPATWQHLGLTPPQDNTTLFP
NT seq 1059 nt   +upstreamnt  +downstreamnt
gtgcctgacaccgaccacccccgcgacgacatcgacctcgacagccaacgactcgtatcc
aacggagccgacgacctcgaacgagcagccgaagcagcactgcgcccacgcaccctcacc
gaattcgttggccaacccatcgtacgagaacaactcaaactcgtcctcgacgccgcaaaa
ggccgaggcgcatcccccgaccacgtcctgctctccggccccccaggactcggaaaaaca
acactcgccatgatcatcgccgcagaactaggagtctcactccgagtcacatcaggccca
gcaatccaacacgccggcgacctcgcagcagtcctatcctcactcgatgaaggtgaagtc
ctcttcatcgacgaaatccaccgactcgcacgaccagccgaagaactcctctacgtcgcc
atggaagacttccgcgtcgacgtcgtcgtcggaaaaggcgcaggcgcctcagcaatccca
ctctccctgccacgattcacagccgtcggtgccacaacccgagccggactcctgcccgca
ccactacgagacagattcggattcaccggtcacctcgacttctacgacgccaccgacctc
gaacgagtagtccaccgatcagcacacctcctcggagtcgaactctcaccacaagccgcc
caagaaatcgccacgcgctcgcggggtacgccacgcatcgccaacaggctgctgcggcgg
gtgcgtgactgggcgcaagtcaaaggaacgggtgtccttgacttgtcagcggcccaagcc
gcactgacagtttatgaagttgatgcgcttggtcttgaccgtctcgaccgggctgtcctc
accgcattgtgtactcgattcggtggaggcccggtgggtttgtccacactcgctgtgacg
gtgggagaggaaccagagacagtggaaacagtggctgaaccattcctggtgcgtgaagga
ctgatggggcggaccccgcgcggacgcatcgccacaccagccacctggcagcacctgggg
ctcactcctccgcaggacaacacaactcttttcccctag

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