Jonesia denitrificans: Jden_1442
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Entry
Jden_1442 CDS
T00972
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
jde
Jonesia denitrificans
Pathway
jde00061
Fatty acid biosynthesis
jde00071
Fatty acid degradation
jde01100
Metabolic pathways
jde01212
Fatty acid metabolism
jde02024
Quorum sensing
jde04146
Peroxisome
Module
jde_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Jden_1442
00071 Fatty acid degradation
Jden_1442
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Jden_1442
09145 Cellular community - prokaryotes
02024 Quorum sensing
Jden_1442
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
jde01004
]
Jden_1442
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jde04147
]
Jden_1442
Enzymes [BR:
jde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Jden_1442
Lipid biosynthesis proteins [BR:
jde01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Jden_1442
Exosome [BR:
jde04147
]
Exosomal proteins
Exosomal proteins of breast milk
Jden_1442
Exosomal proteins of breast cancer cells
Jden_1442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ACV09092
UniProt:
C7R4N5
LinkDB
All DBs
Position
1551755..1553566
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AA seq
603 aa
AA seq
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MDEAITPPLVEVNPQHNLNDLLARRVTADPQGTIMEVMSPQGTWSAITASDFLEEVHGVA
RGLIASGIEPGDRVGIMSRTRYEWSLLDWSIWAAGAVTVPLYETSSAEQVEWILQDAGVK
LLIVENEQLHSVASEAFDNAPQLSDSLVIDNGAISELRARGAEVPEEERNHRASLATLDS
LATIIYTSGTTGRPKGVCLNHRNFYELSDNAATRLREVLDYGARRTLLFMPLAHVFARFI
HVLVIPGGSVLGHVSDTKDLLPALASFQPTYILSVPRVFEKVYNASEQKAVAGGKGKIFH
WAARASIAFSRARDTPHGPSLGLRVQHRIADKLVLSKLRAALGGHAQYAISGGAALGERL
GHFFRGAGLVVLEGYGLTETTAPTAVNVPDRVKIGTVGPPLPGCAIRVDADGEILVRGPH
VFSQYHNNDEATRLAFDGEWFRTGDLGSLDEDGYLRITGRKKEIIVTAGGKNVAPAVLED
RVRSHPLVSQVVVVGDGQPFIAAMITLDAEALPGWLSAHGHPAMSVSQAKETAHVRAALD
QAIERANKAVSRAESIRKYVVLDTDFTVDNGYLTPSLKVKRTEVLRDYSREVDSLYADVK
RVD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcaataactcccccactcgttgaggtcaatcctcaacacaacctcaatgac
ctcctcgcccgccgggtcaccgctgacccacaagggaccatcatggaagtgatgtcaccc
caagggacctggtctgcaatcacagcgtcagatttccttgaggaagtccacggcgttgca
cgaggattgatcgcctcaggaattgagcctggcgatcgtgtcggcatcatgtcacgcaca
cgctatgagtggtcacttcttgattggtcaatttgggcagcaggcgctgtgacagtgccg
ctctacgaaacctcaagtgctgaacaagtcgaatggatcctgcaagatgccggagtgaag
ttgctcattgttgaaaatgaacaacttcactcggtggcaagcgaggcgtttgacaatgct
ccccagctttcagacagcctcgtcattgacaatggtgccatcagcgaattgcgtgctcgt
ggggccgaagtcccagaagaagaacgcaaccatcgagccagtcttgccaccctcgactct
ctcgccaccatcatttacacctccggaacaacaggacgccctaaaggagtgtgtctcaac
caccgaaacttctacgagctatccgacaacgcagcaacgcggctgcgtgaagtcctcgac
tacggtgcacgacgcacactgcttttcatgccgcttgcacacgtctttgcccggttcatt
cacgttcttgtcatccccggtgggtcagtgttgggccacgtgtccgacaccaaagacctg
ttaccagcccttgcctcatttcaaccgacgtacattttgtctgtacctagggtgttcgaa
aaggtctacaacgcctccgagcaaaaggctgtcgcaggaggaaaagggaagattttccac
tgggcggcgcgggcgtcaattgccttttcgcgagcacgtgacactccgcatgggccttcg
ttaggtttgagagtccaacaccgcatagctgacaaactcgtcttgtccaagcttcgtgcg
gccttggggggacacgcgcaatacgcgatctccggcggggcagcgttaggagaacgcctt
ggacacttcttccgcggtgcagggcttgtggtgttggaagggtacggcctgacagaaacc
accgcacccactgcagtcaacgtgcctgatcgggtgaagattggcacagttgggcccccg
ctcccagggtgcgcgattcgagtcgatgccgatggcgagatcctggtccgcggcccacac
gtgttctcgcagtaccacaacaacgatgaagcaacacggcttgcgtttgatggtgagtgg
ttccgaaccggcgatttgggttcactcgatgaggatgggtatctacgcatcacgggacgc
aagaaggaaatcattgtgactgcaggtgggaaaaatgtcgcacctgcagtgcttgaagac
cgggtgcgttctcaccctcttgtgagtcaggttgttgtggttggtgacggacaaccgttc
attgctgccatgatcacccttgacgcagaggctctgcctggatggctcagcgcccatggg
caccctgcaatgtcggtcagccaggcaaaggagactgcacacgttcgcgccgcgctcgat
caagcaattgagcgagcaaataaagcagtctcccgcgctgaatccatccgaaagtacgtt
gtcctcgacactgatttcaccgtcgataacggctatttgaccccctcgctgaaagtcaag
cggaccgaagttctccgcgactactcacgtgaagttgatagcttgtatgccgacgtgaag
cgagttgactaa
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