Jonesia denitrificans: Jden_1624
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Entry
Jden_1624 CDS
T00972
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jde
Jonesia denitrificans
Pathway
jde03030
DNA replication
jde03430
Mismatch repair
jde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jden_1624
03430 Mismatch repair
Jden_1624
03440 Homologous recombination
Jden_1624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jde03032
]
Jden_1624
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_1624
Enzymes [BR:
jde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jden_1624
DNA replication proteins [BR:
jde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Jden_1624
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Jden_1624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Spore_III_AB
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACV09272
UniProt:
C7R5J9
LinkDB
All DBs
Position
complement(1752777..1753673)
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AA seq
298 aa
AA seq
DB search
MTGYAVIDVETTGLSSRNDRVIELAVVHTDTHGTITGHWETLINPQRNLTAQHIHHIHAS
HIQHAPLFADIATDLLTLLDGRVPVAHNAPFDARFLAAELHRTGKTLHQQHDFLCTMNLS
RRYLPGVGKPLADCLAATNITNTGAHTALADATATAQLLAHYIHNSPPTDWEPHLTKATT
NRHHHTPPPLTARWHPRANATPDNTATIILNALDPDAFDLTTPTDHTTYLTALTRTITTA
LTQGHLTDNDTYALAELGNTMGMSRDTASELHERLYHELVQQMPEQSRAIAHLLAVGD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgacaggctacgcagtcatcgacgtcgaaaccaccggactcagctcacgcaacgaccgc
gtcatcgaactcgccgtcgtccacaccgacacccacggaaccatcaccggccactgggaa
acactcatcaacccccaacgcaacctcaccgcccaacacatccaccacatccacgcctcc
cacatccaacacgccccactcttcgccgacatcgccaccgacctcctcaccctcctcgac
ggccgcgtcccagtcgcccacaacgcacccttcgacgcccgattcctcgccgccgaactc
caccgcaccggaaaaaccctccaccaacaacacgacttcctatgcaccatgaacctctcc
cgacgctacctacccggagtaggcaaacccctcgccgactgcctagccgccaccaacatc
accaacaccggcgcccacaccgcactcgccgacgccaccgcaaccgcacaactcctcgcc
cactacatccacaacagcccacccaccgactgggaaccccacctcaccaaagccaccacc
aaccgacaccaccacacacccccacccctcaccgcacgctggcacccacgagccaacgcc
acccccgacaacaccgccaccatcatcctcaacgccctcgaccccgacgcattcgacctc
accacacccacagaccacaccacctacctcaccgccctcacccgcaccatcaccacagcc
ctcacccaaggacacctcaccgacaacgacacctacgcgctcgcagaactgggcaacacc
atgggaatgtcccgagacacggcgtctgaactgcacgaacgtctctaccacgaactggtg
caacaaatgccagagcagtccagagcgatcgcgcatctgcttgccgtcggggattaa
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