Jonesia denitrificans: Jden_1927
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Entry
Jden_1927 CDS
T00972
Name
(GenBank) alpha amylase catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
jde
Jonesia denitrificans
Pathway
jde00500
Starch and sucrose metabolism
jde01100
Metabolic pathways
jde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Jden_1927
Enzymes [BR:
jde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Jden_1927
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
Alpha-amylase
Alpha-amylase_C
CBM26
Motif
Other DBs
NCBI-ProteinID:
ACV09569
UniProt:
C7R011
LinkDB
All DBs
Position
complement(2108585..2111329)
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AA seq
914 aa
AA seq
DB search
MRMHTPTERTPRTRRVWRIGYPMIATLSTAFLLIVAGAVPASSAPQLDLPRVASTDVDTG
LVRSVDGEPSGTHVIANLFQWNWTSVAQECTTSIGPAGYDYVQVSPPQEHVLGDAWWTSY
QPVSYRIESKLGTRAEFEAMVDTCRDAGVGIIADAVINHMSGSPEGEGWAGTPYSEENYP
GPEGQYTPANFNDCKTDIADYNNREQVQNCRLVGLQDLATGTDYVRQEIAAYLDDLADLG
VAGYRIDAAKHMPAADLEAIKAATTTAKNLYWVHEVIGSGGEPIQPSEYLGSGDSHEFNY
ARTLRSRFGGDIADLQLLGTHLTLLPSDDAGVFVDNHDTERNGETLSYKDGDRYVLANVF
MLSYPYGLPTVYSGYEFSERDAGAPQDSTGLIDDVTCADGAWTCMHRNPVITSMVGFAHH
VAGEPVTDWATVSENVIGYGRDDKGFVVINNSADSVTHTFTTSLPAGTYCDVLASDCTEL
TVDAQGTVDITVAPMSAVALSTDNASNLQPRDVVVPDTVTVYYSTAAGWDDYYLHYGVGD
SWTTVPGEQMQPACDGFVAAQITTNGTPPVVTFNDGSGTWDSNNGANYTVTREHTLIRNG
VTHEMDPCSFDRAGQTTVYYAVNPNWVEHRFHYSVGLRGWTQVPGDLMYPACEGWVKKTI
DTGGEDIEGVFNSEGMEWDNNQEQNYHLSGRYVHVNEGTVTSGNPCDGQDELDEPTTPEP
EPEEPANPDYTTTRVYYRSADQWATTYIHFGVAGGAWTEVPGIEMAQVCDGWLRHDIDSE
GRRVQVAFNDGGENWDSNNGANYQVTSESVTIEDGVLAEGDPCPTVTEPDTDNPDNADDT
DSGQGSGDNPGTDSGVEGDDLQAGAGAGSGGAGDELADTGADLMAVLALSALSILLAGMG
FMVRKGRLGRQSIR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgcatacccccaccgaacgcacgccacgtacccgccgggtgtggcgcatcggc
tacccaatgattgcaacgctatcaaccgctttcctgctcatcgtggccggggcagtgcct
gcctcgagcgcccctcaactcgacctgccccgtgtggcctcaacggacgtggacacagga
cttgtgcgcagcgttgacggcgaaccgagcggcacacacgtcattgccaacctatttcaa
tggaactggacgtccgtagcccaggaatgtacaacctctatcggcccagccgggtacgac
tacgtgcaagtatccccaccccaagagcatgtcctgggcgacgcctggtggacctcctac
cagcctgtgagctaccgcattgagtcgaaactgggaaccagggcagaatttgaggccatg
gtggacacctgccgtgacgcaggcgtcggcatcattgccgatgcggtgatcaaccacatg
agcggctcgcctgaaggagaaggctgggcgggcacgccatactccgaagagaactaccca
ggcccggaagggcaatacactccggcgaacttcaatgactgtaaaaccgacattgctgac
tacaacaaccgcgaacaggtacaaaactgccgtctcgtaggtctgcaagatctcgctacg
ggaactgactatgttcgtcaagaaatcgccgcgtacctcgatgacctcgctgacttaggg
gtggctggctaccgtattgacgctgccaaacacatgcccgcagctgacctcgaagcgatc
aaggcagcaacaaccacagcaaaaaacctctactgggtgcatgaagtgattgggtctgga
ggggaaccgatccaacccagtgaatacttaggttctggggattcccatgagttcaactat
gcacgcacgttgcgctcccgcttcggtggcgatatcgccgacctgcaacttctcggcacc
cacctcacactcctgccctcagatgacgccggtgttttcgtggacaatcacgacactgag
cgcaacggtgaaactctcagctacaaagatggcgaccgctacgtgttagccaacgtgttc
atgttgtcttacccctatgggctgcccaccgtgtacagcggatatgagttctctgagcgt
gacgccggtgcgccacaagacagcactggactcatcgacgatgtgacctgtgcagacggc
gcgtggacgtgtatgcaccgaaaccctgtcatcacatcaatggtgggattcgcccaccat
gtggctggtgaacctgtcaccgactgggcaaccgtcagcgagaacgttattggttatggg
cgcgatgacaagggatttgtggtcatcaacaactcagcagatagcgtgacccacaccttc
accacatccctgcctgccgggacgtattgtgacgtgttggcttctgattgcacggagctg
actgtcgatgcgcaaggaacagtcgacatcactgtcgcgccgatgtctgcagtggcgttg
tccacggacaatgccagcaacttgcaaccacgagacgtcgttgtccctgacaccgtcacg
gtgtactactccactgctgcggggtgggacgactattaccttcactacggagtcggggac
agctggactacagttcctggcgaacagatgcaaccagcgtgtgacggctttgtcgccgca
cagatcacaacgaacggcaccccacctgtggtgacattcaacgacggatcaggaacgtgg
gactccaacaacggggcaaactacacagtgacccgtgaacacacactcatccgcaacggt
gtcacacacgagatggacccctgctcctttgatcgagctgggcaaacaacggtctactat
gccgtgaacccgaactgggttgagcatcggttccactacagtgtcggactccgtggctgg
acgcaagttcccggtgacctcatgtaccctgcctgcgaaggatgggtgaaaaagaccatc
gacacagggggtgaggacattgaaggagtgttcaattccgaagggatggaatgggacaac
aaccaggaacagaattatcatctgtccggacgttacgttcacgtcaatgagggaactgtg
acttcagggaacccgtgtgacgggcaagacgaactggacgagccgacgaccccggaacct
gaaccagaggaaccggcgaaccctgactacacaacgacccgcgtctactaccgttctgct
gatcagtgggcaaccacgtacatccactttggtgtggctggtggagcatggactgaggtg
ccgggtattgaaatggcccaggtgtgtgacggttggctgcgccatgacattgattcagaa
ggacgtcgagtccaggtggcattcaatgatggaggcgagaactgggactccaacaacggt
gcgaactaccaggtcactagtgaatcagtcactattgaggacggtgttcttgctgagggg
gatccctgcccaacagtcaccgagccggacaccgataatccagacaacgcagatgacaca
gactcagggcagggcagtggggataacccgggaactgacagtggtgttgagggcgatgat
ctgcaagctggcgctggcgctggcagcggcggtgccggggacgaactggctgacacggga
gccgacctcatggcggtcctggcgttgtctgccctctcgatccttcttgcaggcatgggc
ttcatggtacgcaagggtcgtctggggcgacaaagcattcgctga
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