Jonesia denitrificans: Jden_2197
Help
Entry
Jden_2197 CDS
T00972
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jde
Jonesia denitrificans
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jde03032
]
Jden_2197
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_2197
Enzymes [BR:
jde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Jden_2197
DNA replication proteins [BR:
jde03032
]
Prokaryotic type
DNA Topoisomerases
Jden_2197
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Jden_2197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
BpsA_C
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACV09834
UniProt:
C7R1J9
LinkDB
All DBs
Position
complement(2370472..2373243)
Genome browser
AA seq
923 aa
AA seq
DB search
MSQGRKLVIVESPAKARTISAYLGADFDVEASVGHIRDLPQPSELPAEMKKSGYGKFAVD
VDNGFAPYYEVYPDKKKKVTELRRLLKDADELYLATDEDREGEAIAWHLLEALKPKVPVK
RMVFHEITREAIQRALTTTRDLDERLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGR
VQSVATRLVVERERERMAFVPASYWDVTAQFEATQGQDAGGTFQARLTHVDGTRVATGRD
FTDRGELKARDVVHLTEDAATTLAQSLTDAPATVASLDTKPYTRRPAAPFTTSTLQQEAS
RKLRMSSKTAMRVAQTLYENGYITYMRTDSPALSAQAISAARSQAADLYGTEFVPEKPRH
YASKSKGAQEAHEAIRPAGDTFRTPAQVANVLSGDQFRLYELIWKRTVASQMADARGSTA
SVRIDVPGQVDGQTTTATFSASGTVITFRGFLAAYEEGRDVDRYDDGSQSDGRLPHMVEG
DPLASRDVSADGHTTTPPPRFTEASLVKALEERGIGRPSTYASTISTIQDRGYVNNRGQA
LVPSWLAFSVIRLLEEHFSQLIDYDFTAQMESDLDEIAAGQGDRVNWLTQFYFGGAGGDK
AGLKELVEGLGDIDAREINTVSLGEGIVLRVGRYGPYIEHLTADTAEGENPPRASVPDDI
APDELTLDVARDLLENQKDGDIELGSDPVSGHMIVAKSGRFGPYVTEIIPEPELDESMSA
AAKKKAKAALPKPRTASLFKSHSLTTITLDEALQLLSLPRVVGVDPDTGTEITANNGRYG
PYLKKGTDSRTITSEEQLLTITLDEALEIYKQPKRGRGATASAPLRELGVDPTSEKPIVI
KDGRFGPYVTDGKTNRTLPKDATVESVTFEQAVELLAEKRAKAPVKRATRTTAKKSTATK
KTTTTAAKKTPAKKTTATKKTQS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaggacgaaaactcgtcatcgtggagtcaccagcgaaggcgcgcactatttcc
gcctatctgggtgctgattttgatgttgaagcgagtgtggggcatattcgcgacctgcca
cagcctagtgaacttcctgctgagatgaagaagtcggggtatggcaagttcgctgttgat
gtggacaatgggttcgccccttattacgaggtgtatccggataaaaagaagaaagtcacg
gaactgcgccggctgctcaaagatgcggatgaactgtatcttgctaccgatgaggaccgg
gaaggtgaagcgattgcgtggcaccttcttgaggcgttgaaaccgaaggtgccggtcaaa
cgtatggtgtttcacgaaatcacccgggaggcaatccagcgtgcgttgacaacgacccgt
gaccttgatgagcggcttgtcgatgcgcaagaaacacgccgtattttggaccggttgtac
gggtatgaagtatctccggtgttgtggcgtaaagttcggcaagggttgtccgccgggcgc
gtacagtcggtggctactcgcctggtcgtggagcgggaacgcgagcggatggcgtttgta
cctgcgagctattgggatgtgactgcgcagttcgaagcgacccaagggcaagacgcagga
ggtaccttccaggctcggctgacccatgtggatgggacacgggtcgccaccggccgtgac
ttcactgaccgcggtgaactcaaggcgcgtgacgtggtgcacctgacggaagatgctgcc
acgacgttggctcagtcgctgactgacgctccagcgaccgttgcgtcactggacacgaaa
ccctatacccgccgcccagcggctcccttcaccacgtcaacgttgcagcaggaagcgtcg
cgaaaactgcgaatgtcctcaaaaacagcgatgcgggtggcacaaacgctgtacgaaaac
gggtatatcacctacatgcgtaccgactcgccggcgttatcagctcaagcgatcagtgct
gcgcgaagccaagcagcagacttgtacggtactgagtttgtgcccgaaaaaccacgccac
tatgcgtcaaagtctaaaggtgctcaggaagcgcacgaagcgatccgccctgcgggggac
acgttccgcacgccagcccaggtggccaatgtgttgagtggagaccagttccggctctat
gaactcatttggaagcgcacggtggcctcccagatggctgatgcgcgtggttcgactgcg
tctgtgcgtattgatgtgccggggcaggttgatggacaaacaaccaccgccacattttcc
gcatcgggtacggtcatcaccttccgtgggttccttgcagcctacgaggaaggtcgcgat
gttgaccgttatgatgacgggtcgcaatctgatgggcgtcttcctcacatggtggaaggt
gacccgttggcgtcacgtgacgtttctgctgacggtcacacgacaaccccaccaccgcgg
tttaccgaagcgtccttggtgaaagcactggaagaacggggtattggacgcccctcgacc
tacgcatcgactatttccaccatccaggaccgtggctatgtgaacaatcgagggcaggcg
cttgtcccctcgtggttggcattctctgtgatccgactactggaagagcacttcagtcaa
ctcattgactatgactttacggcccaaatggaatcggacctcgatgagatcgctgctggt
cagggagaccgggtcaattggcttacgcagttctattttgggggagccggaggcgacaag
gctggcttgaaggaactggtggaagggctcggggacattgatgcccgagagatcaacacc
gtgtcactgggtgagggcattgttcttcgggtggggcgttatgggccgtatatcgagcac
ttgacggcagacaccgcggaaggtgagaacccgccgcgtgcgtccgtcccagacgacatt
gcaccagatgaactgacacttgacgttgctcgcgacttgttggaaaaccagaaagacggc
gacattgaacttgggtcagacccagttagtgggcacatgattgtcgcgaagtctggacgg
tttggcccctacgtcaccgagatcatcccagaaccggaactcgatgagtcgatgtccgct
gcggcaaagaaaaaagcgaaggccgcgctacccaagccgcgcacggcatcactgttcaaa
tctcattcgctgacaacgatcacactggatgaggcgctccaactgttgtcgttgccgcgt
gtggttggtgtggacccggacaccggaacagagatcacggcgaacaatggtcgctacggc
ccctatctcaagaagggaacagactcacggacgatcacgtccgaggagcaactgctcacg
atcacgcttgatgaagcactagagatctacaagcaacccaagcgaggacgtggggcaaca
gcgtccgcgccgttgcgcgagttgggcgtggacccgaccagtgagaagcccattgtcatt
aaagatggccggtttggtccttacgtcaccgacggaaaaacaaaccgtactctgcccaaa
gatgccaccgttgagtccgtgacctttgagcaagccgtcgaacttctcgcggaaaagcgc
gcgaaagcgccagtcaagcgggcgacccgcacgaccgcgaagaaaagcaccgcgaccaag
aaaaccacaacaactgccgcaaaaaagacgccagccaagaaaacgacagcgacaaagaag
actcaatcctga
DBGET
integrated database retrieval system
