KEGG   Jeotgalicoccus sp. ATCC 8456: JEM45_01965
Entry
JEM45_01965       CDS       T06966                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
jea  Jeotgalicoccus sp. ATCC 8456
Brite
KEGG Orthology (KO) [BR:jea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jea03032]
    JEM45_01965
   03036 Chromosome and associated proteins [BR:jea03036]
    JEM45_01965
   03400 DNA repair and recombination proteins [BR:jea03400]
    JEM45_01965
DNA replication proteins [BR:jea03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JEM45_01965
Chromosome and associated proteins [BR:jea03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    JEM45_01965
DNA repair and recombination proteins [BR:jea03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      JEM45_01965
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 Glycos_trans_3N
Other DBs
NCBI-ProteinID: QQD85420
UniProt: A0A7T5BUM4
LinkDB
Position
complement(364201..364473)
AA seq 90 aa
MNKTDLINAVSDKADLTKKEAGAAVDAVFESIQGSLSKGEKVQLIGFGNFEVRERAARKG
RNPQSGEEIEIPASKVPAFKAGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataagacagatttaatcaacgctgtcagcgataaagctgatttgacgaaaaaagaa
gcaggagctgctgtagacgcagtcttcgaatcaattcaaggttcactttctaaaggtgaa
aaagtacaattaattggattcggtaactttgaagtacgtgaacgtgctgcaagaaaaggc
cgtaacccacagtctggtgaagaaattgaaattccagcatcaaaagtacctgcatttaaa
gctggtaaagcacttaaagacgcagttaaataa

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