Jeotgalicoccus sp. ATCC 8456: JEM45_02545
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Entry
JEM45_02545 CDS
T06966
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
jea
Jeotgalicoccus sp. ATCC 8456
Pathway
jea03030
DNA replication
jea03430
Mismatch repair
jea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JEM45_02545 (holA)
03430 Mismatch repair
JEM45_02545 (holA)
03440 Homologous recombination
JEM45_02545 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jea03032
]
JEM45_02545 (holA)
03400 DNA repair and recombination proteins [BR:
jea03400
]
JEM45_02545 (holA)
Enzymes [BR:
jea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JEM45_02545 (holA)
DNA replication proteins [BR:
jea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JEM45_02545 (holA)
DNA repair and recombination proteins [BR:
jea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JEM45_02545 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
RraB
DNAX_ATPase_lid
Motif
Other DBs
NCBI-ProteinID:
QQD85525
UniProt:
A0A7T5BUQ6
LinkDB
All DBs
Position
complement(468385..469347)
Genome browser
AA seq
320 aa
AA seq
DB search
MELLQLMYGTNITRIEDEVKKIAKSYAGDLDDFNFTRLNLKETSIETVVEEAQTLPFLTD
RKVLVIDDALIFTANKNTGSVNHNIDLLLDYLTKKNDDTMILFTVYTEKLDNRKKLTKVL
KEKGKVTEINEMTERELSLYVESVLNQENIEIHSEALELLLERTSYKYENVHNELSKLLL
YTDGDITLEDVKEVVSISLEQNVFLLTEFILKNEKEKAVQLGRELILQKEEPMKLLHLII
GQFRLFYQVKILNQQGYQEDNIAKALKVHPYRVKLALRHVRKFPLENLLSKMMLCRDIDY
KFKSSYLDRNTLFELFILEI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaattgctacaattaatgtacggcaccaatatcacacggattgaagatgaggttaaa
aaaatcgctaaaagttatgcaggtgacttagatgacttcaatttcactcgtttgaatcta
aaagaaacatctattgaaacggttgtagaagaggctcaaaccttaccatttttgacagat
agaaaagtgttggtcattgatgatgcgcttatatttactgcaaacaagaatacaggttct
gtcaatcataatatcgacttgttacttgattatttaacaaaaaagaatgatgatacaatg
attctttttactgtgtacacagagaagcttgataaccgaaaaaaactaacgaaagtctta
aaggaaaaaggtaaggtcactgaaattaatgaaatgactgaacgtgagctttctttatat
gttgaaagtgtccttaaccaagaaaacattgagatacatagtgaggcattggaactgctt
ttagaaagaacgagctataaatatgaaaatgttcataatgaactttcaaaactgttgctt
tatacagatggtgacattactttagaggatgttaaagaagttgttagtatttcccttgaa
caaaatgtatttttactgacagaatttatcttgaaaaatgaaaaggaaaaagcagtacaa
cttggacgcgaactcatacttcaaaaagaagagccgatgaaattgttacatctaatcata
ggacagttccgtttgttttaccaagtgaagattttaaatcaacagggttatcaagaggac
aatatcgccaaagcattaaaagtgcatccctacagggtgaagttggcgcttagacacgtt
agaaaattccctttagaaaatctcttatctaagatgatgctatgccgagatattgactat
aaatttaagtcatcgtatttagatcggaatactttatttgaattatttatattagaaata
tag
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