Jeotgalicoccus sp. ATCC 8456: JEM45_03545
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Entry
JEM45_03545 CDS
T06966
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jea
Jeotgalicoccus sp. ATCC 8456
Brite
KEGG Orthology (KO) [BR:
jea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jea03016
]
JEM45_03545 (truB)
Enzymes [BR:
jea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JEM45_03545 (truB)
Transfer RNA biogenesis [BR:
jea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JEM45_03545 (truB)
Prokaryotic type
JEM45_03545 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QQD85711
UniProt:
A0A7T4X2S3
LinkDB
All DBs
Position
complement(697563..698510)
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AA seq
315 aa
AA seq
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MTNQKHGVVVVDKPSGMTSHDVVFKMRKVLKTKRVGHTGTLDPDVTGVLPIVVGDATKLT
EILQMRDKRYSATVTLGIATDTEDASGNVTARQVVGENMSIDTVKEAIQSFIGGYSQMVP
MYSSVKVNGRKLYDYARNGEIVDRPVKDIYIEDIKLTSDIRKDSSTLSFDIDVKCSKGTY
IRTLAFDIGKALGYPAHMSYLRRTASCGFSLDDATPLQDLIENPEAVNVIPVIEILDDQV
HFDISDDQALQFKITNGQKLVKSDILNVLGLTELDTVLFTHQNVPIGIYKTHVDKPDQLK
PFKMFSNLWGAYGNI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccaaaaacatggtgttgtggtggtggacaaaccgagcggtatgacttctcat
gatgtcgtcttcaagatgcgtaaagtcctgaagacaaaacgtgttggtcacacaggaaca
ctcgatccagatgtcactggtgtcttaccaatcgtagtgggtgatgccactaagctcact
gagatcttacaaatgagagacaagcgctatagtgcaacagttacattaggaatcgcaaca
gatactgaagatgcatcagggaatgttactgcacgtcaagtggtaggtgaaaacatgagt
attgacacagtcaaagaggcgattcaatcattcattggtggttatagccaaatggtacct
atgtacagctcagtcaaagtcaacggaagaaaactttatgattacgcgagaaatggcgaa
attgttgaccgtcctgtaaaagatatctacatcgaggacataaaattgacttctgacatt
agaaaggattcgagtactttatcttttgatattgatgtgaagtgttctaaaggaacctac
attagaacacttgcatttgatattggtaaagcgcttggctatcctgcacacatgtcttat
ttgaggcggacggcttcttgtggattttcccttgatgatgcgacgccacttcaggattta
attgaaaaccctgaggcagttaatgttatcccggttattgagattttagatgatcaagtt
cattttgatattagtgatgaccaagctttacaatttaaaatcactaacgggcaaaaattg
gtcaaaagtgatatattaaatgtgctaggtttaactgaactcgacacggttttatttacg
catcagaacgtgccgattggcatctacaaaacgcacgtagataagccggatcagcttaag
ccatttaaaatgtttagtaacttatggggggcttatggaaatatttag
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