Jeotgalicoccus sp. ATCC 8456: JEM45_03580
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Entry
JEM45_03580 CDS
T06966
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
jea
Jeotgalicoccus sp. ATCC 8456
Pathway
jea03030
DNA replication
jea03430
Mismatch repair
jea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JEM45_03580
03430 Mismatch repair
JEM45_03580
03440 Homologous recombination
JEM45_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jea03032
]
JEM45_03580
03400 DNA repair and recombination proteins [BR:
jea03400
]
JEM45_03580
Enzymes [BR:
jea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JEM45_03580
DNA replication proteins [BR:
jea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JEM45_03580
DNA repair and recombination proteins [BR:
jea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JEM45_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol3_a_NII
RNase_H_2
DEDDh_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QQD85718
UniProt:
A0A7T5BUA0
LinkDB
All DBs
Position
complement(703270..707553)
Genome browser
AA seq
1427 aa
AA seq
DB search
MEGQDKLSILLQRANIQQNNYLEDASLTKVVVDDQSRKWQFHLKTSRIIPSTLYQLMNQN
IKAAFKDIATTELIMSSADFDEQTVLDYFDIAVDSLTINDNIKHQLKGTAKKLQDETLFI
AVKNSIEEAHFNKHINGNLTTAYKYFGIHLQGVKVTVDDELQNTRTEALENRINDEREAL
ISEFINRREQESEAEDTKKDVQKQIGKPQTFDGVRPLENIFDEENSVKIEGHIFDKEIRE
LKSGRQILQLKLTDYTDSIMAKMFSRHGKNDEDVFGALEVGDWVIIEGRVEYDEFTRDMV
LNIRNLTAVNKKPKKDYGDEKRVELHLHSAMSQMDGMTSISEYIKRAKSFGHDALAITDH
NNVQAFPEAFNATAGDEDFKMIFGMEGMLVGDGAPIAYRPQNYNLDTHDFVVFDVETTGL
SSKYDQIIELAGVKVRNGEVVDKFERFANPGEKLTELIKELTGITDDMLVGAPDISEVIT
DFKKWVGDAIFVAHNASFDVGFIDEAYEKQGFGESTNGVIDTLELSRTINTKMKKHGLNI
LAKHYNVDLTQHHRAIYDAEATAYIFIKMMAQLKRDYGVTNHQDINRSLSNSDSYKRAMP
SHVSILVENNTGLKNLFKIVSLSLTDNFYKSPRIKRQVLEEHREGLLIGSACDNGEVFTA
MMQKSYEEAKKKAYFYDYIEVFPKPLYQRLLDREVVRDEAVLEEIIENMIKLGKDLDKPV
VATGNVHYLDESDKLSRDILVKSNPGNPLSRGNLPDAHFRTTDEMLELFDFLDEDTAYEI
VVTNTRKIASKIDRVEVIKKDLFPPKIEGAEQEIRDMSYNNAKALYGEDVPEIVVERLEK
ELESIIGNGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATMTEITEVNPLPPHYVC
PKCKQSEFFTDGSVSSGYDLPDKQCENCQVDLIKEGQDIPFETFLGFKGDKVPDIDLNFS
GVYQPKAHNYTKELFGEDYVYRAGTIGTVAEKTAFGYVKGYLNDNGLHKRAAEIDRLVIG
CSGVKRTTGQHPGGIIVVPDDMDIYDFTPIQYPADDIEAEWKTTHFDFHSIDNNLLKLDI
LGHDDPTMIRMLQDLSGIDPTTVPTDDKATMGLFSSPSSLGVDQDQILCKTGTLGIPEFG
TGFVRQMLEDTRPTTFSELVQISGLSHGTDVWLGNAQDLIRKGICDLSNVIGCRDDIMVT
LMYKGLEPSLAFNIMEKVRKGKGLTPEHELAMRENGVESWYIDSCKKIKYMFPKAHAAAY
VLNSVRIAYFKVHHPLYYYASYFTVRASDFDLLTFVKDKDTIRHRVKEMNANFQELSKKE
KDTLVVLELVNEMTQRGYRMQPVNVDKSHATDFIIEGDTLIPPFESVPGLGRSVANRIVE
AREDGGFISKEDLNKKAGVSQKLIDYLTELGSLDHLPDKAQLSIFDI
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggacaagataaattaagtattttgcttcagcgggcgaatatccaacagaataac
tatttagaagatgcatcactgacaaaagttgttgtcgatgatcagtctcgtaagtggcag
tttcatttgaaaacgtctagaatcattccgagcacactctatcagctcatgaatcaaaat
attaaagcagcttttaaagatatcgcgacaacagaattgattatgtcatcggcagatttt
gatgaacagactgtcttagattattttgatattgcagtagatagtttaactataaacgac
aatataaagcatcagttaaagggaactgcaaaaaaactacaagatgaaaccctttttatt
gcggttaagaatagtattgaagaagcgcactttaacaaacatatcaacggcaacttaacg
acggcctataaatattttggtattcatctacaaggtgtaaaagtgaccgtcgatgatgaa
cttcaaaacactcgtacagaagcgctagaaaatagaatcaatgatgaaagagaagcgctg
atatctgaattcattaatagacgtgaacaagagagtgaagcagaagacactaaaaaagat
gttcaaaaacaaatcggtaaaccgcagacatttgacggagtacggccattagaaaacatt
tttgatgaggaaaacagtgtcaaaatagaaggtcatatttttgataaggaaatccgtgag
ctaaaaagtggccgtcaaattttacaattaaagctaacggactatacggattctattatg
gctaagatgttctctcgccatggtaaaaacgatgaggatgtattcggtgctttagaagtg
ggagattgggtgataattgaaggccgtgttgaatacgatgaatttacacgtgatatggtc
ttaaatattagaaatcttaccgcagtcaataagaaaccgaaaaaagattacggagatgaa
aaacgcgtagaattacaccttcattctgccatgagtcaaatggatggtatgacgagtatc
agtgaatacatcaaacgcgcgaaatctttcggacacgatgctctagcgattacagaccat
aataatgttcaagccttcccagaagcctttaatgcaactgcaggtgatgaggactttaag
atgatttttggcatggagggcatgctcgtcggtgacggtgcaccaattgcctatagacct
cagaattataatttagacacacatgattttgtggtctttgacgtcgagacaacaggacta
tcatctaaatatgatcaaattatcgaacttgctggagttaaggtaagaaacggggaagtt
gtagataagtttgaacgttttgcaaatccaggtgaaaaattaactgaactgatcaaagaa
ttaacaggtatcacagatgatatgcttgtcggagcccctgatattagtgaagtcattact
gacttcaaaaaatgggtcggagatgcaatttttgttgctcataatgcgagctttgatgtg
ggctttatagatgaagcctatgaaaaacaaggttttggtgaatctacaaatggtgtcatt
gataccttagagttgtcacgtacaattaatacgaagatgaaaaagcatggattaaatatc
ttagccaagcactataacgtagatttaactcagcaccatagagccatttacgacgccgaa
gcgacagcttatatctttattaagatgatggcacagctaaaaagagactacggtgtaacg
aatcaccaggatattaaccgtagcttatcgaatagtgattcatataaacgtgctatgcct
tctcacgtgtcgattcttgtagaaaataatactggcttaaagaacctctttaaaatagtc
agcctatcattaacggataatttctataaatcacctagaattaaaagacaagtactagaa
gagcaccgtgagggcttacttatcggtagtgcgtgtgataacggtgaggtctttactgct
atgatgcagaagtcttatgaagaagcgaagaaaaaagcgtatttctatgattatatagaa
gtctttccaaaaccactctatcagagacttttagaccgtgaagttgtcagagatgaagcg
gtcttagaagaaataatagaaaacatgattaagcttggtaaggaccttgacaaaccagtc
gttgcaacaggtaatgttcactacttagatgagtcagataagctttctcgtgatatttta
gtcaaatcaaatcctggtaatcccttatcaagagggaacctacccgatgctcactttaga
acgacagatgagatgttagagctgttcgactttttagatgaagatacagcctatgaaatc
gttgtgacgaacacacgtaaaatcgcgagtaaaattgatagagttgaagtgattaagaaa
gatctcttcccacctaaaattgaaggagcagaacaagaaattagagatatgtcatacaac
aatgctaaggcgctttatggtgaagatgtgcctgaaattgttgtcgagcgtttagagaaa
gaacttgagagtattattggtaacggctttgccgtcatctatttaatatcacataaactt
gtaaaacgttcacttgatgatggttatctcgtaggttcaaggggttcagttggttcaagc
ttagttgccactatgaccgagattacggaggttaaccctttaccaccgcattacgtttgt
ccaaaatgtaagcagtctgagttctttacagatggttcagtctcttctggttatgattta
ccggacaaacagtgtgaaaactgccaagtcgacttgattaaagaaggccaagatattcct
tttgaaaccttccttggctttaaaggggataaagttccagatattgacttaaacttctct
ggtgtttatcaacctaaagcgcacaactatacgaaagaattgtttggtgaggactatgtc
taccgtgcgggaacgattggtacagttgcagaaaaaacggcctttggttatgttaaaggg
tatttaaacgataatggtctgcataagcgtgctgctgaaattgaccggctcgtcattggc
tgttctggtgtaaaacgtacaacaggtcagcatccaggtgggataattgttgttccagat
gacatggatatttatgactttacgccgatccaatatcctgcagatgatattgaagcagaa
tggaagacgacacactttgacttccactctattgataataacttattgaaactggatata
cttggacacgatgatccgactatgattcgcatgctacaagacttatctggtatcgatcca
acaacagtaccaactgatgacaaggcaacgatggggctgttttcatcaccgagttcactc
ggtgtggaccaagatcaaattttatgtaagaccggaaccttaggtataccagagtttggt
acagggttcgtgcgtcagatgttagaggacacgagaccgacaacgttctcagaactcgta
caaatttcaggattatctcacggtaccgatgtttggttaggcaatgcccaagacctcatt
agaaaagggatttgcgacttatctaatgtaattggttgtcgtgacgatatcatggtgacc
ttgatgtataaaggacttgaaccgagtctagccttcaacattatggagaaggtgcgtaaa
ggtaagggactcactcccgaacacgaacttgccatgagagaaaacggcgttgagagctgg
tacatcgattcttgtaagaaaatcaagtacatgttcccgaaagcccatgccgcagcttac
gtattaaactcagtacgtattgcttattttaaagtacatcatccactctattattatgca
tcgtactttacagtccgagcatcagactttgatttgttaacgttcgtaaaagataaagat
acgatccggcatagagtcaaagagatgaatgcaaatttccaagaactctctaaaaaagag
aaagatacattagtcgtcttagagcttgtgaatgaaatgacgcaacgtggctatagaatg
cagccagtcaacgtcgacaaatcacatgcgacggacttcatcattgagggtgatacgcta
attccgccttttgaatctgttccaggacttgggcgttctgtggcgaaccgtatcgttgag
gcaagagaagatggtggctttatatctaaagaagacttgaacaagaaagcaggtgtatct
caaaaacttatcgactacttaacagagctcggaagtttagatcaccttccagacaaagcg
cagttgtcaatctttgacatctag
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integrated database retrieval system
